Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMC4Q9NTJ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 DEFB108F-201ENST00000344638 222 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL672167.1-206ENST00000356293 943 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 RNU6-433P-201ENST00000363216 104 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 SNORA38.1-201ENST00000364172 131 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 RNA5SP88-201ENST00000365560 109 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 RNU6-1200P-201ENST00000384162 107 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 SNORD67-201ENST00000390833 111 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC110754.1-201ENST00000399740 601 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL591034.1-201ENST00000407447 340 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 MIR1305-201ENST00000408300 86 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 MTCO1P17-201ENST00000411522 491 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 TPMTP3-201ENST00000411928 735 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC098592.1-201ENST00000419352 333 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC125238.1-201ENST00000448842 249 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC004263.1-201ENST00000479327 332 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC106872.3-201ENST00000495104 446 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 DEFB108D-201ENST00000527787 222 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC087276.1-201ENST00000529659 480 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 MIR3921-201ENST00000577308 85 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 MIR5195-201ENST00000583555 115 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 VN1R90P-201ENST00000595717 726 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AP001429.1-201ENST00000602568 530 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL161756.2-201ENST00000604597 246 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL158211.4-201ENST00000606988 584 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AC099506.2-201ENST00000623074 221 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AP000676.3-201ENST00000623299 569 ntBASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC4Q9NTJ3 ZNF807-201ENST00000328088 1707 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 RAP1BP1-201ENST00000412709 553 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC016696.1-201ENST00000446949 318 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AP000542.1-201ENST00000448473 371 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC017015.1-201ENST00000477387 286 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC108860.1-201ENST00000484521 383 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC034159.1-201ENST00000513885 583 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 MTATP6P15-201ENST00000527233 835 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 SETP2-201ENST00000553886 926 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 OR4T1P-201ENST00000554933 911 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 MIR5004-201ENST00000579078 107 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.98□□□□□ -1.77
SMC4Q9NTJ3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 U3.6-201ENST00000363622 211 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC007899.1-201ENST00000412776 775 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 MTND1P21-201ENST00000412991 285 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 BX119904.4-201ENST00000424402 301 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AL593851.1-201ENST00000426171 157 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC090774.1-201ENST00000435925 246 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC112653.1-201ENST00000443851 386 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 MTCO2P6-201ENST00000463134 685 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 POU5F1P7-201ENST00000508759 541 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC026801.2-201ENST00000515352 425 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 RNU6-1129P-201ENST00000515964 104 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms