Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNU5A-1-201ENST00000362698 116 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNU1-13P-201ENST00000384499 162 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 SNORD116-4-201ENST00000384733 96 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC110754.1-201ENST00000399740 601 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNU2-16P-201ENST00000410712 136 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP107-201ENST00000411358 122 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RPL21P24-201ENST00000413752 448 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 HMGB3P20-201ENST00000417997 600 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RPS15AP12-201ENST00000419498 388 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 MTCO3P5-201ENST00000433620 714 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 OR4C10P-201ENST00000434991 931 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 CYCSP43-201ENST00000438233 310 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC122718.1-201ENST00000439448 744 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 FAM133DP-201ENST00000464802 691 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC010587.1-201ENST00000505809 469 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 Y_RNA.655-201ENST00000515919 96 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-840P-201ENST00000517275 65 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL391156.1-201ENST00000554965 554 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 OR4H12P-201ENST00000556269 907 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC006960.3-201ENST00000561845 705 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 ZNF192P1-203ENST00000565888 810 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 MIR4293-201ENST00000584305 78 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AP001029.3-201ENST00000588063 596 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL606834.2-201ENST00000602954 668 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC090425.2-201ENST00000608818 501 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AP000254.1-201ENST00000609934 520 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AL589743.7-201ENST00000612637 233 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 FP236240.3-201ENST00000623061 327 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC110994.2-201ENST00000635481 492 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
SLC6A13Q9NSD5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RNU5E-1-201ENST00000362477 120 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RNU1-64P-201ENST00000365443 163 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RPL7P60-201ENST00000397636 735 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 TXNP7-201ENST00000406296 293 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 C1DP2-201ENST00000418167 426 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 RPL27AP8-201ENST00000424277 446 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 ARF4P2-201ENST00000430209 526 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC006480.1-201ENST00000449887 378 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 NANOGP10-201ENST00000453325 895 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 TPT1P7-201ENST00000458300 517 ntBASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC6A13Q9NSD5 CDC42P4-201ENST00000510507 563 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms