Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL132640.3-201ENST00000630473 177 ntBASIC7.12□□□□□ -1.27
RTN4Q9NQC3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC7.12□□□□□ -1.27
RTN4Q9NQC3 AC233981.2-201ENST00000611524 1614 ntBASIC7.12□□□□□ -1.27
RTN4Q9NQC3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 TUBBP10-201ENST00000427668 1301 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RNU6-874P-201ENST00000362390 105 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RNA5SP152-201ENST00000365184 110 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RNU6-142P-201ENST00000384019 107 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 MIR301B-201ENST00000390813 78 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AL591034.1-201ENST00000407447 340 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RAB9AP3-201ENST00000412737 573 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AL356968.1-201ENST00000416622 474 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RPS6P12-201ENST00000432491 726 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 RAB9AP1-201ENST00000449393 573 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 SCARNA5-201ENST00000516201 276 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 Xist_exon1.1-201ENST00000618930 85 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AL159153.1-201ENST00000619688 317 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AC006206.1-201ENST00000544842 3387 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 AC068254.2-201ENST00000623938 3577 ntBASIC7.11□□□□□ -1.27
RTN4Q9NQC3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTN4Q9NQC3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RNU6-942P-201ENST00000363002 107 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RNU6-505P-201ENST00000384427 107 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 U3.43-201ENST00000410734 213 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 AL929472.1-201ENST00000417484 429 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 CYP4F30P-202ENST00000420048 405 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 OR2AM1P-201ENST00000422137 422 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 SPATA20P1-201ENST00000423089 438 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RPSAP65-201ENST00000429660 595 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 CBX3P6-201ENST00000430257 527 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 PCNPP5-201ENST00000452246 481 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RPS26P21-201ENST00000475397 348 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 RNU6-1271P-201ENST00000517049 105 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 AC022882.1-201ENST00000532142 501 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 MTND4LP5-201ENST00000605152 292 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 MIR8062-201ENST00000621515 85 ntBASIC7.1□□□□□ -1.27
RTN4Q9NQC3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.1□□□□□ -1.27
RTN4Q9NQC3 HAUS6P2-201ENST00000433254 2404 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 OR56A5-201ENST00000340110 738 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 RNU1-100P-201ENST00000365255 165 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 RNU1-136P-201ENST00000384181 164 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 RN7SKP91-201ENST00000410852 288 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 MRPS21P5-201ENST00000417885 231 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 AC009362.1-201ENST00000427253 406 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 USP9YP16-201ENST00000430287 407 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 FCF1P4-201ENST00000448326 183 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 USP9YP23-201ENST00000455085 407 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.09□□□□□ -1.27
RTN4Q9NQC3 IGKV2D-38-201ENST00000518423 240 ntBASIC7.09□□□□□ -1.27
RTN4Q9NQC3 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms