Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL590383.1-201ENST00000428602 75 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC093155.1-201ENST00000440164 826 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 BTBD7P2-201ENST00000441962 620 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL096829.2-201ENST00000446582 742 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 RAB9AP1-201ENST00000449393 573 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 OFD1P3Y-201ENST00000453312 783 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 NDUFA5P9-201ENST00000472609 340 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 MTND4LP31-201ENST00000514859 294 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 RNU6-1261P-201ENST00000517194 104 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC103783.1-201ENST00000520506 373 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 OR4R2P-201ENST00000530815 597 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC007954.1-201ENST00000554198 494 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC005498.1-201ENST00000592125 465 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL355877.2-201ENST00000603670 358 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL590392.1-201ENST00000604960 446 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL136295.6-201ENST00000610486 658 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 MIR7515-201ENST00000637837 67 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC097714.1-201ENST00000511272 1647 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC005832.2-201ENST00000538921 1430 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 SNRPEP3-201ENST00000338402 276 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 RNA5SP124-201ENST00000362739 110 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 SNORA41-201ENST00000384675 132 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 MTATP6P27-201ENST00000416987 621 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 CCDC58P2-201ENST00000417131 366 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 PPP1R11P2-201ENST00000423543 382 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 HMGN2P31-201ENST00000432430 273 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 BNIP3P2-201ENST00000441221 577 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 MOB1AP2-201ENST00000446060 614 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 FAM172BP-201ENST00000487497 1089 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 TMEM251P1-201ENST00000503717 318 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC093677.1-201ENST00000514414 678 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AP001189.2-201ENST00000527320 189 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 HIGD1AP5-201ENST00000529959 259 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AL132857.1-201ENST00000555180 708 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 HMGN2P15-201ENST00000585707 270 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AL035411.2-201ENST00000604022 421 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AL121917.1-203ENST00000605534 577 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC010975.3-201ENST00000618727 978 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 MIR6758-201ENST00000620653 63 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AC008443.7-201ENST00000622195 246 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 MIR6730-201ENST00000622213 67 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AL355480.1-201ENST00000629041 99 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
VCX3AQ9NNX9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 OR56A5-201ENST00000340110 738 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 MIR506-201ENST00000384998 124 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 ATP5F1P3-201ENST00000397213 657 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 DHFRP6-201ENST00000401776 268 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AL138827.1-201ENST00000402666 306 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 RPL17P35-201ENST00000432217 549 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC007389.2-201ENST00000434630 306 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC090453.1-201ENST00000495560 436 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC027338.1-201ENST00000514840 825 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 RNU6-334P-201ENST00000517072 102 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AL391261.3-201ENST00000557194 520 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 APOOP1-201ENST00000604695 592 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 AC098657.3-201ENST00000620434 263 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms