Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.96
LRRC40Q9H9A6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
LRRC40Q9H9A6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 snoZ40.1-201ENST00000364540 72 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 HMGB1P17-201ENST00000403495 628 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 SNORA11-201ENST00000408789 128 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 Z85995.1-201ENST00000415547 335 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 OR4K6P-201ENST00000416478 897 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 OR4K11P-201ENST00000431829 904 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC093156.1-201ENST00000440382 670 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 RPL39P40-201ENST00000445481 146 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 SEM1P1-201ENST00000506694 209 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 OR5BM1P-201ENST00000512021 366 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC091826.1-201ENST00000514065 313 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 MTCO3P13-201ENST00000577757 781 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC009237.15-201ENST00000610252 501 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC004696.1-201ENST00000614345 607 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AP003476.1-201ENST00000623984 516 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AC109315.1-201ENST00000584143 1347 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 AL049641.1-201ENST00000441055 1948 ntBASIC2.83□□□□□ -1.96
LRRC40Q9H9A6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC009487.2-201ENST00000420969 6821 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 SNORA36C-201ENST00000384289 132 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AL512633.1-201ENST00000399931 655 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 RNA5SP492-201ENST00000411330 114 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 RPL19P1-201ENST00000411635 428 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC099548.1-201ENST00000421443 426 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AL139132.1-201ENST00000431587 344 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 snoU13.8-201ENST00000458890 104 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 RNU7-23P-201ENST00000459465 62 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC098799.2-201ENST00000509466 868 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 XKRY-201ENST00000510392 1100 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AP002748.2-201ENST00000528671 348 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 LRRC6P1-201ENST00000532188 885 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC022080.3-201ENST00000544433 482 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC068313.1-201ENST00000604028 1008 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC093673.2-201ENST00000609674 331 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC023158.2-201ENST00000614876 543 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC40Q9H9A6 AC007785.2-201ENST00000598627 1916 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 SDAD1P2-201ENST00000441308 2028 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 UBA52P6-201ENST00000399822 382 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 TPMTP2-201ENST00000414372 726 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC008850.1-201ENST00000427546 362 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 DDX3P2-201ENST00000446138 111 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC103975.1-201ENST00000482506 483 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AP001025.2-201ENST00000490908 477 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 SUMO2P5-201ENST00000506790 245 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 SLC25A15P5-201ENST00000508033 253 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC010546.1-201ENST00000569391 485 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC008277.2-201ENST00000605196 797 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC093732.2-201ENST00000607950 274 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AL161734.1-201ENST00000609720 557 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 RNU6-1192P-201ENST00000612197 107 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AC024257.5-201ENST00000612739 531 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 RNU6-489P-201ENST00000618289 107 ntBASIC2.81□□□□□ -1.96
LRRC40Q9H9A6 AL159972.1-201ENST00000625150 448 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms