Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 RNU6-878P-201ENST00000384578 110 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AL356057.3-201ENST00000402607 340 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 MIR1284-201ENST00000408337 120 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 MTCYBP38-201ENST00000417160 1123 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 RPS25P9-201ENST00000435591 252 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 snoU109.4-201ENST00000458953 143 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 RNU1-103P-201ENST00000516502 125 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 CYCSP2-201ENST00000558168 301 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AF131215.7-201ENST00000602443 707 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC022022.2-201ENST00000602989 360 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AC093424.1-201ENST00000604999 338 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AL158042.1-201ENST00000605338 460 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AP003485.2-201ENST00000623636 610 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 OR4G11P-202ENST00000642116 1414 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 RNA5SP295-201ENST00000362655 121 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 RNU6-343P-201ENST00000364709 104 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 SNORD51-201ENST00000384320 80 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 MIR34A-201ENST00000385130 110 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 RNU6-952P-201ENST00000391164 108 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AP000567.1-201ENST00000406413 156 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 RNU2-52P-201ENST00000410680 190 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 PIGPP2-201ENST00000411569 458 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 TPMTP2-201ENST00000414372 726 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC092447.6-201ENST00000414578 210 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 MTCO2P21-201ENST00000419780 677 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AL590233.1-201ENST00000430017 456 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 ARL5AP4-201ENST00000430731 512 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC092754.2-201ENST00000463506 460 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC097493.1-201ENST00000463958 372 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 MTCYBP35-201ENST00000503630 1137 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 HSPE1P23-201ENST00000509838 286 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC026412.2-201ENST00000512270 1075 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 Y_RNA.717-201ENST00000517106 92 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC009712.1-201ENST00000564938 316 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC078899.3-201ENST00000599065 212 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 XIAPP1-201ENST00000603162 600 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC012669.1-201ENST00000603209 283 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC112220.3-201ENST00000605502 502 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC063944.3-201ENST00000609969 533 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC021755.4-201ENST00000616620 456 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC092608.2-201ENST00000624427 218 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
RNF41Q9H4P4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RNU6-1214P-201ENST00000363650 109 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RNU6-837P-201ENST00000391056 108 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AL121972.1-201ENST00000402023 252 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF41Q9H4P4 RPLP0P7-201ENST00000416050 667 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 YPEL5P1-201ENST00000419731 367 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AL953862.1-201ENST00000423016 168 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 AC093151.1-201ENST00000427711 313 ntBASIC3.11□□□□□ -1.91
RNF41Q9H4P4 TXNL1P1-201ENST00000429528 554 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms