Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AP003385.6-201ENST00000531603 374 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AC034268.2-201ENST00000571784 482 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 BNIP3P8-201ENST00000597863 560 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC112191.3-201ENST00000604371 277 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC004853.1-201ENST00000604902 698 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 AC091834.1-201ENST00000614543 472 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 AC084757.4-201ENST00000616350 526 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 U73479.1-201ENST00000618062 168 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 MIR7975-201ENST00000619350 68 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.81□□□□□ -1.8
CDT1Q9H211 OR5AK4P-201ENST00000635912 903 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 PRO1804-201ENST00000623780 2050 ntBASIC3.81□□□□□ -1.8
CDT1Q9H211 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
CDT1Q9H211 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.81□□□□□ -1.8
CDT1Q9H211 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CDT1Q9H211 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDT1Q9H211 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDT1Q9H211 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDT1Q9H211 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDT1Q9H211 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 SNORD51-201ENST00000384320 80 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 RNU6-821P-201ENST00000390995 107 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 Y_RNA.582-201ENST00000391023 95 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AL391417.1-201ENST00000404100 426 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 USP9YP13-201ENST00000417797 480 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 HMGB1P25-201ENST00000468402 607 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 RPL7P49-201ENST00000471402 708 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 AC006390.1-201ENST00000508068 283 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 AC023141.12-201ENST00000512399 199 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 RNU2-58P-201ENST00000516403 183 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 NARSP2-201ENST00000518524 679 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AC022878.1-201ENST00000530684 149 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AC124947.2-202ENST00000552735 133 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 RPS3AP4-201ENST00000555161 764 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.8□□□□□ -1.8
CDT1Q9H211 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 HMGN2P28-201ENST00000606102 262 ntBASIC3.8□□□□□ -1.8
CDT1Q9H211 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDT1Q9H211 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.8□□□□□ -1.8
CDT1Q9H211 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
CDT1Q9H211 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.79□□□□□ -1.8
CDT1Q9H211 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 Y_RNA.88-201ENST00000363029 99 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDT1Q9H211 RNU6-1042P-201ENST00000384204 107 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 RPS20P2-201ENST00000402520 389 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 BTF3P7-201ENST00000407097 488 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 Y_RNA.608-201ENST00000410647 95 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.79□□□□□ -1.8
CDT1Q9H211 RPS7P15-201ENST00000415804 584 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AC006548.1-201ENST00000427470 102 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC097713.2-201ENST00000430199 356 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 NEK4P1-201ENST00000433383 879 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AL138799.3-201ENST00000438968 350 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 FGF7P6-202ENST00000451282 293 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 PRSS3P4-201ENST00000453323 162 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 SNRPFP4-201ENST00000456366 242 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 LARP1BP2-201ENST00000486594 519 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC112204.1-201ENST00000502591 103 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC026784.1-201ENST00000507986 352 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 RNU6-1003P-201ENST00000517099 105 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
CDT1Q9H211 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.79□□□□□ -1.8
CDT1Q9H211 AP004242.1-201ENST00000533701 349 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AL121576.1-201ENST00000556055 276 ntBASIC3.79□□□□□ -1.8
CDT1Q9H211 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms