Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC092447.10-201ENST00000620607 1652 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CCT4P2-201ENST00000233836 1548 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 Y_RNA.51-201ENST00000362725 102 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 U3.11-201ENST00000364476 212 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 RN7SKP142-201ENST00000411236 328 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 BTF3L4P1-201ENST00000413813 468 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AL356968.1-201ENST00000416622 474 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC010153.1-201ENST00000432862 727 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 COX6CP2-201ENST00000444980 225 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 CDC27P1-201ENST00000445384 715 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 APOOP4-201ENST00000513530 597 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AP004371.1-201ENST00000525240 214 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AP003497.1-201ENST00000528472 562 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC087481.2-201ENST00000565492 330 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 MIR5697-201ENST00000578045 78 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 OR4K8P-201ENST00000578842 1048 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC015917.1-201ENST00000579654 510 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC073544.2-201ENST00000601155 540 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AL109618.2-201ENST00000605527 211 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AL356585.4-201ENST00000623078 1229 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AC025048.6-202ENST00000627667 438 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 AL392088.2-201ENST00000637607 285 ntBASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD1Q9GZZ0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-335P-201ENST00000364563 113 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 Y_RNA.318-201ENST00000365131 97 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 VN1R108P-201ENST00000431580 830 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC109583.1-201ENST00000432156 268 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 GOT2P5-201ENST00000433995 546 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC104308.1-201ENST00000454621 333 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 MTND4LP3-201ENST00000468320 276 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC021382.1-201ENST00000483523 359 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC034222.1-201ENST00000494052 532 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC010424.1-201ENST00000506336 297 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-1095P-201ENST00000516148 108 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 IGKV2-26-201ENST00000518305 343 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AP002748.2-201ENST00000528671 348 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AL121603.1-201ENST00000553815 142 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RSL24D1P11-201ENST00000591045 491 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AL031176.1-201ENST00000604554 466 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC068276.1-201ENST00000605793 379 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RN7SKP299-201ENST00000606679 301 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms