Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 HMGB1P6-201ENST00000569046 646 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 MIR3200-201ENST00000580767 85 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC008739.2-201ENST00000597006 317 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 BNIP3P27-201ENST00000599991 412 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC091057.2-201ENST00000602594 792 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC004852.3-201ENST00000614131 326 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC004696.1-201ENST00000614345 607 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AL121895.2-201ENST00000619558 447 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AL159972.1-201ENST00000625150 448 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC092447.7-201ENST00000422212 1621 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 SNORA44-201ENST00000384584 132 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 MIR128-1-201ENST00000384921 82 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 MIR620-201ENST00000385232 95 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 MIR325-201ENST00000385260 98 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 SPA17P1-201ENST00000416656 452 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC018630.2-202ENST00000422992 927 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AL139132.1-201ENST00000431587 344 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 ARPC3P5-201ENST00000448802 534 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 NIPA2P5-201ENST00000452282 464 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 RPS29P26-201ENST00000477483 171 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC011825.1-201ENST00000484967 388 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 SCARNA13-201ENST00000516672 275 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 BBIP1P1-201ENST00000602999 279 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AL158211.4-201ENST00000606988 584 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AL138478.1-201ENST00000612252 832 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 PART1_2.1-201ENST00000612397 250 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC104763.3-201ENST00000613765 618 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC090132.2-201ENST00000615881 347 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 AC231657.1-201ENST00000624313 397 ntBASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
POLR1EQ9GZS1 ZNF833P-201ENST00000424938 1494 ntBASIC2.9□□□□□ -1.94
POLR1EQ9GZS1 AL079343.1-201ENST00000572358 1771 ntBASIC2.9□□□□□ -1.94
POLR1EQ9GZS1 OR4G2P-202ENST00000641004 1759 ntBASIC2.9□□□□□ -1.94
POLR1EQ9GZS1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC138915.1-201ENST00000565427 1685 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 RNU1-105P-201ENST00000363470 161 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 SNORD116-12-201ENST00000384468 92 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 MIR514A1-201ENST00000385133 98 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 SNORA48.2-201ENST00000390926 124 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 UBA52P6-201ENST00000399822 382 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC068533.2-201ENST00000411872 306 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 TPMTP2-201ENST00000414372 726 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 OR4K11P-201ENST00000431829 904 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 NANOGP2-201ENST00000435391 727 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL358794.1-201ENST00000445689 381 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 RNU6-1256P-201ENST00000516539 103 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 SNORA31.22-201ENST00000517204 135 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC124947.2-202ENST00000552735 133 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL132657.2-201ENST00000564417 358 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC010620.2-201ENST00000600135 313 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC024153.1-201ENST00000603103 365 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC013553.2-201ENST00000604244 589 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AL627309.6-201ENST00000606857 840 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR1EQ9GZS1 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms