Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 NAMPTP2-201ENST00000505629 1115 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC104108.1-201ENST00000509930 412 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC008716.1-201ENST00000511084 513 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 TTC39CP1-201ENST00000512513 755 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC126177.3-201ENST00000551839 688 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 FAM60BP-201ENST00000578364 658 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC106900.2-201ENST00000604994 317 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AL353748.2-201ENST00000622148 471 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC104454.1-201ENST00000421341 1401 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 SNORA67.1-201ENST00000364749 141 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RNU6-921P-201ENST00000384361 107 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC096533.1-201ENST00000411645 353 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RPL27AP8-201ENST00000424277 446 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RPS15AP7-201ENST00000439294 405 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC096638.1-201ENST00000444678 216 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC092798.1-201ENST00000458542 409 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 GZMAP1-201ENST00000503054 631 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RN7SKP40-201ENST00000517211 242 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 RNU1-104P-201ENST00000517280 175 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 MED28P6-201ENST00000558776 231 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC055876.5-201ENST00000605667 259 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AP004247.3-201ENST00000608682 624 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 AC110994.2-201ENST00000635481 492 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 MFSD8-245ENST00000641743 948 ntBASIC2.65□□□□□ -1.99
UPF3BQ9BZI7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 MIR221-201ENST00000385135 110 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 TATDN1P1-201ENST00000414123 891 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC234775.1-201ENST00000454247 670 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC104435.1-201ENST00000483483 166 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC009977.1-201ENST00000586015 570 ntBASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3BQ9BZI7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 MIRLET7G-201ENST00000362280 84 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 SNORD115-48-201ENST00000364764 76 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 RPP40P1-201ENST00000426762 456 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC093422.3-201ENST00000428506 305 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC004866.2-201ENST00000438285 481 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 RPS20P24-201ENST00000457473 361 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC107222.1-201ENST00000510899 637 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC007115.1-201ENST00000546853 234 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC013562.2-201ENST00000611632 603 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AL136981.2-201ENST00000617319 734 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AP006248.3-201ENST00000623580 594 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 AC068880.5-201ENST00000624331 290 ntBASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF3BQ9BZI7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 MTND5P6-201ENST00000422338 1798 ntBASIC2.62□□□□□ -1.99
UPF3BQ9BZI7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms