Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 MAPK10-344ENST00000641718 3746 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 SNORA63.1-201ENST00000362493 131 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 SNORA70F-201ENST00000384142 135 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RNU6-257P-201ENST00000410238 98 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RNU2-52P-201ENST00000410680 190 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RNU6-651P-201ENST00000411040 105 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 HSPD1P21-201ENST00000436541 245 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 KNOP1P3-201ENST00000446933 426 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC104073.1-201ENST00000451988 151 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 HSPE1P25-201ENST00000455484 251 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 HMGN2P13-201ENST00000476476 274 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC068522.1-201ENST00000482895 345 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC022133.1-201ENST00000490961 571 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AP005403.1-201ENST00000579720 229 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RNU6-85P-201ENST00000605989 107 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 AC069200.1-201ENST00000609511 323 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 RNA5SP196-201ENST00000625967 102 ntBASIC5.4□□□□□ -1.54
COL25A1Q9BXS0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 AC127070.3-201ENST00000503695 3263 ntBASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL25A1Q9BXS0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RNU6-595P-201ENST00000363944 107 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RNA5SP509-201ENST00000364577 119 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.480-201ENST00000384364 102 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RNU6-45P-201ENST00000384471 107 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 U3.35-201ENST00000408405 208 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RNU6-325P-201ENST00000411132 105 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 EI24P4-201ENST00000423683 1078 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 PPIAP3-201ENST00000450588 505 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AL353691.1-201ENST00000451332 387 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RPL31P60-201ENST00000478450 367 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RPL30P10-201ENST00000488148 337 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC005726.1-201ENST00000494679 427 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC135721.1-201ENST00000497954 479 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC097462.2-201ENST00000504623 481 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 RN7SKP276-201ENST00000516242 268 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 SNORA74D-201ENST00000516404 141 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 ERHP1-201ENST00000523006 310 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC120057.2-201ENST00000571520 271 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MIR3138-201ENST00000585238 82 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 AC008739.3-201ENST00000603262 127 ntBASIC5.39□□□□□ -1.55
COL25A1Q9BXS0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms