Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC022364.2-201ENST00000457963 554 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 SNORD97-201ENST00000459187 142 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS1Q99742 AC009646.1-201ENST00000510455 318 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC105914.1-201ENST00000511798 226 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.69□□□□□ -1.82
NPAS1Q99742 MTCO1P35-201ENST00000515270 228 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 RNU6-718P-201ENST00000516166 105 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 SCARNA24.1-201ENST00000516465 137 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.69□□□□□ -1.82
NPAS1Q99742 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS1Q99742 AC006270.2-201ENST00000578523 652 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 GLUD1P4-201ENST00000590914 418 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC020910.2-201ENST00000603635 610 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC103710.2-201ENST00000609912 942 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS1Q99742 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC008785.1-201ENST00000624475 456 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC009161.2-201ENST00000624626 138 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 MAPK10-372ENST00000641954 3413 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS1Q99742 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
NPAS1Q99742 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS1Q99742 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS1Q99742 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPAS1Q99742 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS1Q99742 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 RNU6-1085P-201ENST00000363576 107 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNU6-1097P-201ENST00000363586 107 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 SNORD35B-201ENST00000363660 87 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNA5SP515-201ENST00000364570 118 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNA5SP479-201ENST00000364858 117 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPAS1Q99742 RNU6-39P-201ENST00000384344 107 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 Y_RNA.554-201ENST00000384672 102 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RPL21P65-201ENST00000406094 466 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNU2-9P-201ENST00000410194 145 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNU4-6P-201ENST00000410804 122 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 CRYBB2P1-203ENST00000415709 538 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS1Q99742 MTATP6P4-201ENST00000427725 675 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 VDAC1P3-201ENST00000434069 851 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 RAD23BP3-201ENST00000454157 1152 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AL672167.3-201ENST00000465951 960 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 RN7SL585P-201ENST00000470538 280 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC026427.2-201ENST00000506228 536 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC010342.1-201ENST00000514047 877 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 SNORA70.14-201ENST00000516205 110 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 RNA5SP143-201ENST00000516936 115 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AP001893.2-201ENST00000526949 202 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
NPAS1Q99742 TPRKBP2-201ENST00000565969 475 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC012417.1-201ENST00000582307 1039 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AP002826.1-201ENST00000608835 315 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 SDR42E1P2-201ENST00000614861 481 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC090517.2-201ENST00000614966 680 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC010133.1-201ENST00000615809 842 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 ZYXP1-201ENST00000617638 118 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AL589994.2-201ENST00000621124 579 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 AC139792.3-201ENST00000623525 224 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 ELF2P3-201ENST00000445099 1506 ntBASIC3.68□□□□□ -1.82
NPAS1Q99742 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS1Q99742 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS1Q99742 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS1Q99742 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 AC009812.4-201ENST00000569134 1805 ntBASIC3.67□□□□□ -1.82
NPAS1Q99742 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS1Q99742 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms