Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 MTND2P24-201ENST00000453434 806 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AL359385.1-201ENST00000456509 365 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 RPL31P58-201ENST00000469001 379 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 HMGB1P36-201ENST00000487709 576 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
MEIS3Q99687 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.83□□□□□ -1.8
MEIS3Q99687 MTCO1P30-201ENST00000515244 580 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.83□□□□□ -1.8
MEIS3Q99687 RNU6-202P-201ENST00000515998 96 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 RNU6-150P-201ENST00000516237 95 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 IGKV2-36-201ENST00000519999 223 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.83□□□□□ -1.8
MEIS3Q99687 DEFB131D-201ENST00000526803 184 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC118273.2-201ENST00000532092 465 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC013828.2-201ENST00000532487 235 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 OR6C73P-201ENST00000546432 358 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC068714.1-201ENST00000559623 800 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.83□□□□□ -1.8
MEIS3Q99687 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AC037471.2-201ENST00000564941 598 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC017100.2-201ENST00000584628 355 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.83□□□□□ -1.8
MEIS3Q99687 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.83□□□□□ -1.8
MEIS3Q99687 AL161729.4-201ENST00000604650 476 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 Y_RNA.804-201ENST00000615262 101 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC243756.2-201ENST00000618406 463 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 AC007318.2-201ENST00000620999 243 ntBASIC3.83□□□□□ -1.8
MEIS3Q99687 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.83□□□□□ -1.8
MEIS3Q99687 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MEIS3Q99687 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 MTND4P29-201ENST00000503122 1372 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.82□□□□□ -1.8
MEIS3Q99687 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MEIS3Q99687 RNU6-317P-201ENST00000384031 107 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 U8.14-201ENST00000390843 143 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 SNORA11.1-201ENST00000408133 129 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 RNU6-195P-201ENST00000411352 109 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 RNU2-6P-201ENST00000411404 190 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AL953862.1-201ENST00000423016 168 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC233728.2-201ENST00000425348 757 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 MTND4P28-201ENST00000426217 387 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC073464.1-201ENST00000429823 534 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AL358934.1-201ENST00000432346 324 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.82□□□□□ -1.8
MEIS3Q99687 MTND4LP10-201ENST00000435146 291 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AL451074.3-201ENST00000437709 472 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 RPS3AP12-201ENST00000443616 753 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 SLC31A1P1-201ENST00000451221 567 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AP001992.1-205ENST00000462248 379 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC117440.1-201ENST00000474107 571 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AC026427.2-201ENST00000506228 536 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.82□□□□□ -1.8
MEIS3Q99687 RNU6-583P-201ENST00000516012 92 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AF186190.1-201ENST00000517470 480 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AF279873.1-201ENST00000523393 313 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AK6P1-201ENST00000540219 478 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.82□□□□□ -1.8
MEIS3Q99687 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.82□□□□□ -1.8
MEIS3Q99687 ZNF519P2-201ENST00000557032 169 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC137800.2-201ENST00000574375 120 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.82□□□□□ -1.8
MEIS3Q99687 BNIP3P23-201ENST00000599655 511 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC123786.2-201ENST00000603459 275 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC009994.1-201ENST00000606889 253 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC131902.3-201ENST00000611767 581 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 MIR7973-1-201ENST00000614683 76 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC104010.1-201ENST00000616889 150 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC231657.1-201ENST00000624313 397 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC068880.5-201ENST00000624331 290 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 AC093591.3-201ENST00000634516 308 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 MIR6863-201ENST00000636112 90 ntBASIC3.82□□□□□ -1.8
MEIS3Q99687 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
MEIS3Q99687 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.82□□□□□ -1.8
MEIS3Q99687 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.82□□□□□ -1.8
MEIS3Q99687 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MEIS3Q99687 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
MEIS3Q99687 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.81□□□□□ -1.8
MEIS3Q99687 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms