Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 C2orf27A-204ENST00000623058 969 ntBASIC4.03□□□□□ -1.76
SIN3AQ96ST3 AL356596.1-201ENST00000624230 379 ntBASIC4.03□□□□□ -1.76
SIN3AQ96ST3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.03□□□□□ -1.76
SIN3AQ96ST3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SIN3AQ96ST3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIN3AQ96ST3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.03□□□□□ -1.76
SIN3AQ96ST3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIN3AQ96ST3 ELL2P3-201ENST00000457883 1602 ntBASIC4.03□□□□□ -1.77
SIN3AQ96ST3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNU6-777P-201ENST00000364265 104 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNU6-343P-201ENST00000364709 104 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNU6-723P-201ENST00000383973 107 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNU6-952P-201ENST00000391164 108 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AL590004.2-201ENST00000404787 371 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 NDUFB4P4-201ENST00000404822 243 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 TPMTP2-201ENST00000414372 726 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 PSMA2P3-201ENST00000429685 675 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 ARPC3P5-201ENST00000448802 534 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RPL30P9-201ENST00000465586 330 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RN7SL283P-201ENST00000489055 303 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNA5SP367-201ENST00000516557 118 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC012119.1-201ENST00000603184 222 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AL022161.1-201ENST00000604390 213 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 RNU6-88P-201ENST00000606801 100 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 AC106028.5-201ENST00000610332 395 ntBASIC4.02□□□□□ -1.77
SIN3AQ96ST3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SIN3AQ96ST3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 SNORD82-201ENST00000365530 70 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 SNORD116-9-201ENST00000384000 95 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 SNORD116-3-201ENST00000384287 95 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 SNORD116-7-201ENST00000384404 95 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 SNORD116-5-201ENST00000384462 95 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 MIR153-1-201ENST00000384914 90 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AL138827.1-201ENST00000402666 306 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 TPMTP3-201ENST00000411928 735 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC087499.2-201ENST00000432861 149 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 USP9YP7-201ENST00000436723 430 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 USP9YP32-201ENST00000452432 430 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 RPL31P50-201ENST00000471002 296 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC109486.1-201ENST00000486833 374 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC026801.2-201ENST00000515352 425 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 RNA5SP216-201ENST00000516111 123 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 RNA5SP380-201ENST00000517190 98 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC106038.2-201ENST00000520706 568 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AL133271.1-201ENST00000538229 291 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 HPRT1P3-201ENST00000539521 576 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 ZNF861P-201ENST00000588126 639 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 RPL23AP92-201ENST00000603609 255 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 MTCYBP22-201ENST00000603788 447 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AC064807.4-201ENST00000607201 407 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 MIR7844-201ENST00000616161 122 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AL356266.1-201ENST00000623311 483 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 AL022578.1-201ENST00000439330 1433 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.01□□□□□ -1.77
SIN3AQ96ST3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIN3AQ96ST3 ZNF734P-201ENST00000419494 1534 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 AC008264.2-201ENST00000610193 3731 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIN3AQ96ST3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIN3AQ96ST3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIN3AQ96ST3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4□□□□□ -1.77
SIN3AQ96ST3 RNU6-339P-201ENST00000384310 107 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 NPM1P11-201ENST00000417106 855 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 AC083875.1-201ENST00000419509 405 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 FNDC3CP-201ENST00000420795 1155 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 Z99497.1-201ENST00000421282 135 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4□□□□□ -1.77
SIN3AQ96ST3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SIN3AQ96ST3 AC005517.2-201ENST00000424673 553 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 LARP1BP3-201ENST00000437229 869 ntBASIC4□□□□□ -1.77
SIN3AQ96ST3 AL513043.1-201ENST00000439124 535 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms