Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HNRNPCP4-201ENST00000571636 900 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RN7SL290P-201ENST00000578661 300 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC006023.2-201ENST00000609916 167 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC007996.1-201ENST00000620414 2821 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC112198.2-201ENST00000426589 6996 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC009229.4-201ENST00000623854 1947 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
TRIM47Q96LD4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 Y_RNA.343-201ENST00000365354 112 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC068538.1-201ENST00000376856 336 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 MIR625-201ENST00000385047 85 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 MIR1182-201ENST00000408363 97 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 RPL30P2-201ENST00000414021 291 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC114491.1-201ENST00000416095 246 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 PSMA2P3-201ENST00000429685 675 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 RPS23P7-201ENST00000466210 444 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 SEPT14P8-201ENST00000508026 178 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC144568.1-201ENST00000520139 137 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 PARP1P2-201ENST00000556806 195 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 OR4G2P-202ENST00000641004 1759 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TRIM47Q96LD4 AC011460.1-201ENST00000636268 1834 ntBASIC6.02□□□□□ -1.45
TRIM47Q96LD4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 SNORA70.2-201ENST00000364506 135 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 RNU6-1207P-201ENST00000384343 107 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 MIR628-201ENST00000385229 95 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 RNA5SP241-201ENST00000391326 114 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 GLULP6-201ENST00000399502 913 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PRRC2CP1-201ENST00000404428 159 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 BX842559.1-201ENST00000419615 532 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AL353597.2-202ENST00000434901 373 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 RPL34P20-201ENST00000442771 351 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AL035551.1-201ENST00000446931 348 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC098583.1-201ENST00000480875 255 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC140059.1-201ENST00000489238 361 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC069499.1-201ENST00000489433 509 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC140172.1-201ENST00000502928 141 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AL359273.1-201ENST00000510918 627 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC074133.1-201ENST00000515696 183 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 RN7SL356P-201ENST00000582228 248 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 AC093671.1-201ENST00000624981 2929 ntBASIC6.01□□□□□ -1.45
TRIM47Q96LD4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM47Q96LD4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM47Q96LD4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM47Q96LD4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms