Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-181P-201ENST00000363225 107 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-1155P-201ENST00000363554 107 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNY1P12-201ENST00000364251 105 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RN7SKP227-201ENST00000364445 330 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-432P-201ENST00000384196 109 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MIR181A1-201ENST00000385026 110 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MTCO3P40-201ENST00000392516 676 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RPL7P60-201ENST00000397636 735 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU2-71P-201ENST00000411395 189 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AC004975.1-201ENST00000428733 208 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MTCO2P11-201ENST00000431069 680 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AL500522.2-201ENST00000448562 343 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU7-59P-201ENST00000459101 61 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-445P-201ENST00000516949 107 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AL133153.1-201ENST00000557756 303 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MIR4697-201ENST00000582977 78 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AC006023.2-201ENST00000609916 167 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MIR6810-201ENST00000622701 70 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.35□□□□□ -1.71
CDK5RAP3Q96JB5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL133383.2-201ENST00000622958 2336 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 OR1S2-201ENST00000302592 978 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 RNU2-62P-201ENST00000410868 191 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC069157.1-201ENST00000421749 137 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 DPPA2P1-201ENST00000428060 556 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 ATP5HP2-201ENST00000433885 485 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC002486.1-201ENST00000435098 391 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 RPL35AP22-201ENST00000436855 335 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 UBE2V1P8-201ENST00000437166 265 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL356535.1-201ENST00000440335 398 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 MTCO2P29-201ENST00000465212 189 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 RPL7P23-201ENST00000493874 747 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC135721.1-201ENST00000497954 479 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC114797.1-201ENST00000514003 728 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC010342.1-201ENST00000514047 877 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-718P-201ENST00000516166 105 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 HMGN1P28-201ENST00000521340 364 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC022616.3-201ENST00000523940 148 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 MIR4286-201ENST00000580651 93 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 BNIP3P33-201ENST00000598912 569 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 RBM11P1-201ENST00000604951 799 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC024941.1-201ENST00000612250 334 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 AC090517.2-201ENST00000614966 680 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 MIR6875-201ENST00000617506 72 ntBASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP3Q96JB5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC018555.1-201ENST00000567548 1980 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 Y_RNA.1-201ENST00000352915 104 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 SNORD3H-201ENST00000384486 214 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 SSXP9-201ENST00000417503 292 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC137499.1-201ENST00000427602 88 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC091390.1-201ENST00000433904 331 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms