Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.34□□□□□ -1.71
HPS3Q969F9 MAPK10-373ENST00000641983 6772 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 OR4G2P-201ENST00000328113 903 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.34□□□□□ -1.71
HPS3Q969F9 RNA5SP167-201ENST00000365461 116 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 RNU6-456P-201ENST00000384493 107 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 RNU6-628P-201ENST00000410675 107 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 RPL21P24-201ENST00000413752 448 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC005094.1-201ENST00000440420 368 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 RPS24P6-201ENST00000452670 400 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 RN7SL271P-201ENST00000487601 295 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC078918.1-201ENST00000498515 228 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS3Q969F9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS3Q969F9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HPS3Q969F9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AC091516.1-201ENST00000549191 703 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC128657.1-201ENST00000549459 145 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 CCNG2P1-201ENST00000549521 1000 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 RPL21P12-201ENST00000559810 515 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AC106785.1-201ENST00000565935 262 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS3Q969F9 FAM60BP-201ENST00000578364 658 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AF250324.2-201ENST00000608299 610 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 C2orf27A-204ENST00000623058 969 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 AL136313.1-201ENST00000624804 202 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AP001350.1-201ENST00000601906 1524 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 TAB3P1-202ENST00000452645 1634 ntBASIC4.34□□□□□ -1.71
HPS3Q969F9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HPS3Q969F9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.34□□□□□ -1.71
HPS3Q969F9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.34□□□□□ -1.72
HPS3Q969F9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HPS3Q969F9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
HPS3Q969F9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HPS3Q969F9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS3Q969F9 AC066616.2-201ENST00000559334 1481 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 OR5J1P-201ENST00000313544 939 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 SNORD56.2-201ENST00000363242 71 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 RNU6-1097P-201ENST00000363586 107 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 RNU6-169P-201ENST00000365336 107 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 RNU6-282P-201ENST00000365357 103 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HPS3Q969F9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS3Q969F9 MTCO1P39-201ENST00000426148 480 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS3Q969F9 FTH1P6-201ENST00000430768 320 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 GPR143P-201ENST00000434155 205 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 RPL7P28-201ENST00000437739 740 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 HSFY6P-201ENST00000445573 403 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC079781.2-201ENST00000446424 169 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC016696.1-201ENST00000446949 318 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AP000873.1-201ENST00000463987 400 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 PPIAP15-201ENST00000479662 484 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC106872.2-201ENST00000494303 480 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC004062.1-201ENST00000509926 645 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC023141.12-201ENST00000512399 199 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AP001893.2-201ENST00000526949 202 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AP003072.2-201ENST00000527756 676 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.33□□□□□ -1.72
HPS3Q969F9 SUB1P2-201ENST00000556401 297 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.33□□□□□ -1.72
HPS3Q969F9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.33□□□□□ -1.72
HPS3Q969F9 AC012507.3-201ENST00000603556 477 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 MIR92B-201ENST00000607575 96 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC004067.1-201ENST00000608733 700 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC244100.1-202ENST00000621554 382 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AL359880.1-201ENST00000621879 266 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 MIR6500-201ENST00000622700 86 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 AC138649.5-201ENST00000637456 137 ntBASIC4.33□□□□□ -1.72
HPS3Q969F9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HPS3Q969F9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HPS3Q969F9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HPS3Q969F9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HPS3Q969F9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
HPS3Q969F9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HPS3Q969F9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
HPS3Q969F9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 RNU6-108P-201ENST00000365558 107 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS3Q969F9 AL359837.1-201ENST00000381357 287 ntBASIC4.32□□□□□ -1.72
HPS3Q969F9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms