Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
DDX1Q92499 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX1Q92499 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
DDX1Q92499 OR51H2P-202ENST00000641424 3046 ntBASIC4.83□□□□□ -1.64
DDX1Q92499 AL356489.2-201ENST00000566968 3528 ntBASIC4.83□□□□□ -1.64
DDX1Q92499 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX1Q92499 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 U3.11-201ENST00000364476 212 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 RNA5SP509-201ENST00000364577 119 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 SNORA22B-201ENST00000383876 138 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 SNORA32.2-201ENST00000384049 122 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 RNU6-196P-201ENST00000384315 107 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 RNU6-784P-201ENST00000384330 106 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 SDHCP2-201ENST00000398565 501 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 Y_RNA.605-201ENST00000410577 105 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 NDUFB4P5-201ENST00000415445 361 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC113618.1-201ENST00000416747 285 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX1Q92499 NANOGP10-201ENST00000453325 895 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 RNU7-152P-201ENST00000458982 64 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC011276.1-201ENST00000469688 323 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC068305.1-201ENST00000497406 726 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC135721.1-201ENST00000497954 479 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 RNU2-10P-201ENST00000516375 211 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 Y_RNA.718-201ENST00000517110 102 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX1Q92499 AC090151.1-201ENST00000520784 730 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 SUB1P1-201ENST00000524415 382 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 AC126177.3-201ENST00000551839 688 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.82□□□□□ -1.64
DDX1Q92499 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 FRG2DP-202ENST00000566967 323 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC005668.1-201ENST00000571142 476 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC100830.2-201ENST00000581636 240 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
DDX1Q92499 AC098848.2-201ENST00000588023 330 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 POLR3GP2-201ENST00000588366 668 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX1Q92499 7SK.7-201ENST00000603504 247 ntBASIC4.82□□□□□ -1.64
DDX1Q92499 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.82□□□□□ -1.64
DDX1Q92499 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
DDX1Q92499 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX1Q92499 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
DDX1Q92499 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX1Q92499 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX1Q92499 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX1Q92499 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX1Q92499 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC090337.1-201ENST00000579651 2074 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX1Q92499 RNU1-63P-201ENST00000383902 164 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 Y_RNA.401-201ENST00000383965 117 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RNU6-639P-201ENST00000384074 107 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RPS26P8-201ENST00000393490 348 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AL583834.1-201ENST00000406943 343 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC009237.10-201ENST00000414112 510 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RPL23AP38-201ENST00000423801 469 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX1Q92499 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX1Q92499 RPL23AP93-201ENST00000440847 484 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RPL23AP43-201ENST00000446445 471 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX1Q92499 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC005008.1-201ENST00000456151 612 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 RPL23AP65-201ENST00000475608 468 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC233702.1-201ENST00000482905 502 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX1Q92499 RNU6-410P-201ENST00000517006 107 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AC090572.1-201ENST00000519251 160 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 COX6CP5-201ENST00000527162 228 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 DEFB108D-201ENST00000527787 222 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 OR4R1P-201ENST00000529879 463 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 AL121603.1-201ENST00000553815 142 ntBASIC4.81□□□□□ -1.64
DDX1Q92499 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX1Q92499 AC006270.2-201ENST00000578523 652 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms