Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RBBP4P6-201ENST00000508098 202 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 Y_RNA.673-201ENST00000516306 88 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 RNU6-182P-201ENST00000516970 105 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 RNU6-64P-201ENST00000517119 105 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 SNORA70.24-201ENST00000517233 118 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AL133153.1-201ENST00000557756 303 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC008162.1-201ENST00000604718 254 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AL670379.4-201ENST00000605279 254 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC096772.1-201ENST00000609146 564 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC004817.4-201ENST00000602396 3625 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 RNU6-1226P-201ENST00000384317 107 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 HMGB3P7-201ENST00000400214 611 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 CYCSP19-201ENST00000411715 316 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 RPL21P91-201ENST00000429231 479 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC016696.1-201ENST00000446949 318 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 RPL39P38-201ENST00000467018 153 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC108860.1-201ENST00000484521 383 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC022447.4-201ENST00000504053 364 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 MTND1P19-201ENST00000511780 315 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 Y_RNA.715-201ENST00000517082 110 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AC011494.1-201ENST00000596454 237 ntBASIC8.38□□□□□ -1.07
TRIM41Q8WV44 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM41Q8WV44 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC099654.2-201ENST00000433031 1980 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC096664.2-201ENST00000411843 406 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC079809.1-201ENST00000415468 276 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 SDAD1P3-201ENST00000427380 333 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC011816.1-201ENST00000441346 546 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 MTND4LP30-201ENST00000454092 297 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 RPL23AP56-201ENST00000460778 453 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AP003385.6-201ENST00000531603 374 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC090115.3-201ENST00000553218 849 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AC012443.1-201ENST00000605605 231 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 SNX18P1Y-201ENST00000616231 511 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 U6.104-201ENST00000637979 90 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 Z95114.1-201ENST00000624264 14574 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 SCARNA15-201ENST00000607520 4325 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 AL079305.1-201ENST00000623159 3008 ntBASIC8.37□□□□□ -1.07
TRIM41Q8WV44 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM41Q8WV44 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC074029.4-201ENST00000624796 1859 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RNU6-1059P-201ENST00000363752 98 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RNU1-13P-201ENST00000384499 162 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RNU6-95P-201ENST00000384697 107 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RNU6-387P-201ENST00000411331 105 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AL137014.1-201ENST00000420490 1226 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 RPL9P32-201ENST00000464118 620 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC025465.3-201ENST00000510570 311 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 IL7R-208ENST00000511982 612 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 SNORA14.1-201ENST00000516113 141 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 IGKV2D-23-201ENST00000518179 286 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 HNRNPCP4-201ENST00000571636 900 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM41Q8WV44 MIR4513-201ENST00000581077 86 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 AC110743.1-201ENST00000584870 478 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC8.36□□□□□ -1.07
TRIM41Q8WV44 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms