Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC128713.1-201ENST00000471495 306 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC012181.1-201ENST00000479895 423 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 SRIP1-201ENST00000489235 288 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 XKRY-201ENST00000510392 1100 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC093677.1-201ENST00000514414 678 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC068657.1-201ENST00000520807 306 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC022861.1-201ENST00000522981 663 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 CR383656.7-201ENST00000548164 174 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 OR4K8P-201ENST00000578842 1048 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 COX6CP3-201ENST00000580869 223 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 SNORD84-203ENST00000584275 78 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AP001269.3-201ENST00000588718 329 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC083760.1-201ENST00000589621 670 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AL109653.1-201ENST00000603091 248 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC106900.2-201ENST00000604994 317 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AL390208.1-201ENST00000605885 644 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC080013.4-201ENST00000607624 649 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AC002546.1-201ENST00000588041 2504 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01560Q8TB33 GABRG2-229ENST00000641017 3628 ntBASIC2.29□□□□□ -2.04
LINC01560Q8TB33 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RNA5SP295-201ENST00000362655 121 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 Y_RNA.192-201ENST00000363977 102 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RNU6-343P-201ENST00000364709 104 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 Y_RNA.548-201ENST00000384656 105 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 MIR591-201ENST00000385290 95 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RPL21P3-201ENST00000395517 478 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL136372.1-201ENST00000403060 228 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RNU4-65P-201ENST00000410473 140 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RPS15AP38-201ENST00000413110 372 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC109780.2-201ENST00000413467 845 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL592310.1-201ENST00000414330 671 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 NDUFB4P5-201ENST00000415445 361 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RPLP0P7-201ENST00000416050 667 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 MTATP6P27-201ENST00000416987 621 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 NPM1P11-201ENST00000417106 855 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL513175.2-201ENST00000422071 443 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC092648.1-201ENST00000425870 423 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RPS29P6-201ENST00000438196 145 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC009969.1-201ENST00000438726 172 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RAC1P7-201ENST00000445367 377 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL513124.1-201ENST00000450410 614 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 RNU7-136P-201ENST00000458819 69 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC146507.2-201ENST00000460608 476 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 ANXA2P1-201ENST00000505539 926 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC021146.8-201ENST00000507455 733 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AP002770.2-201ENST00000543613 532 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC079089.3-201ENST00000603094 673 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 DUXAP3-201ENST00000603616 594 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC004853.1-201ENST00000604902 698 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AL451074.6-201ENST00000608512 729 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC131235.4-201ENST00000609288 620 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 AC064859.1-201ENST00000624741 174 ntBASIC2.28□□□□□ -2.04
LINC01560Q8TB33 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.28□□□□□ -2.04
LINC01560Q8TB33 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
LINC01560Q8TB33 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.05
LINC01560Q8TB33 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.05
LINC01560Q8TB33 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.28□□□□□ -2.05
LINC01560Q8TB33 AC007256.1-201ENST00000392253 2765 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01560Q8TB33 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01560Q8TB33 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01560Q8TB33 MAPK10-362ENST00000641864 4484 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 RNU4-68P-201ENST00000364314 141 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 SNORA67.4-201ENST00000384688 142 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 RNU6-882P-201ENST00000391025 103 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 RNU6-952P-201ENST00000391164 108 ntBASIC2.27□□□□□ -2.05
LINC01560Q8TB33 RPL23AP29-201ENST00000397284 453 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms