Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX2-3Q8TAU0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NKX2-3Q8TAU0 RBBP8P1-201ENST00000449447 1844 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 SNORA62-201ENST00000365493 153 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 RNU6-700P-201ENST00000391043 107 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL591034.2-201ENST00000402839 359 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL033519.2-201ENST00000403958 392 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 EZH2P1-201ENST00000431167 291 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC008264.1-201ENST00000447612 367 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC114982.1-201ENST00000469402 321 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC093767.1-201ENST00000504523 156 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 SCARNA16.4-201ENST00000516956 187 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 RNU6-844P-201ENST00000517175 102 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC069113.1-201ENST00000517763 267 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 HMGB1P40-201ENST00000525121 540 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL133271.1-201ENST00000538229 291 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 BNIP3P1-201ENST00000547295 580 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 SYF2P1-201ENST00000550658 413 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC069307.1-201ENST00000602820 447 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AL355816.1-201ENST00000607951 118 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 AC005520.5-201ENST00000613926 164 ntBASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NKX2-3Q8TAU0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 GAPDHP25-201ENST00000447061 1001 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 SNRPCP3-201ENST00000474888 476 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 SNORD116-28-201ENST00000516123 91 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AC090151.1-201ENST00000520784 730 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 FAM60BP-201ENST00000578364 658 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 RN7SL356P-201ENST00000582228 248 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AC011447.4-201ENST00000587562 111 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AC234771.5-201ENST00000600161 514 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AL162424.1-201ENST00000602325 221 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 FP236240.3-201ENST00000623061 327 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 MIR4679-1-201ENST00000637619 75 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AC004158.1-201ENST00000564508 4319 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 AC109446.4-201ENST00000623235 2755 ntBASIC6.28□□□□□ -1.4
NKX2-3Q8TAU0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 SNORA17.1-201ENST00000362945 126 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 U3.13-201ENST00000364804 214 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 RNU6-290P-201ENST00000365212 101 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AL590139.1-201ENST00000416267 400 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 EI24P1-201ENST00000416584 867 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 BX679664.1-201ENST00000434429 253 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC090804.1-201ENST00000448870 490 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AP001324.2-201ENST00000461163 319 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC005726.1-201ENST00000494679 427 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC005798.1-201ENST00000513715 387 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 RNU6-496P-201ENST00000516145 99 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 Y_RNA.719-201ENST00000517156 106 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC104576.1-201ENST00000524225 88 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AL442163.3-201ENST00000554110 156 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AL358913.1-201ENST00000554342 121 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 CPDP1-201ENST00000579660 283 ntBASIC6.27□□□□□ -1.41
NKX2-3Q8TAU0 AC174048.1-201ENST00000603389 144 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms