Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN3Q8NCR9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNU6-128P-201ENST00000383976 107 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 SNORA70-201ENST00000384436 135 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNU6-1179P-201ENST00000384667 107 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 U3.42-201ENST00000408746 214 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RAB28P1-201ENST00000411517 641 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 EEF1B2P3-201ENST00000447718 678 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC009120.1-201ENST00000493458 473 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RN7SL558P-201ENST00000497468 299 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL592156.1-201ENST00000508758 304 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNU1-61P-201ENST00000516107 151 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNU6-277P-201ENST00000516272 106 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC087854.1-201ENST00000519706 414 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC079600.1-201ENST00000550326 297 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MIR5692C1-201ENST00000585309 91 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC073539.2-201ENST00000597113 165 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC009597.2-201ENST00000604659 592 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC113139.1-201ENST00000605049 239 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC108673.3-201ENST00000609183 335 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MIR7109-201ENST00000613748 65 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL110115.1-201ENST00000614396 364 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MIR6721-201ENST00000617181 87 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC245014.3-201ENST00000618589 347 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 SNORD39.4-201ENST00000620099 78 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 OR52H1-202ENST00000641796 1061 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AL133383.2-201ENST00000622958 2336 ntBASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CLRN3Q8NCR9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 FAM35BP-202ENST00000497389 3337 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 MIR412-201ENST00000362142 91 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 RNU6-266P-201ENST00000364225 107 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.813-201ENST00000364639 102 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.460-201ENST00000384255 102 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 MIR513A2-201ENST00000385249 127 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 RNU2-68P-201ENST00000410878 191 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 RNU6-607P-201ENST00000411283 108 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 VN1R36P-201ENST00000414936 291 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AL353621.1-201ENST00000418219 243 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 TMEM167AP1-201ENST00000423409 219 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC092047.1-201ENST00000424997 240 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AL512844.2-201ENST00000433990 593 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC019185.1-201ENST00000442718 389 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC107399.1-201ENST00000451226 265 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms