Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 U2.10-201ENST00000620268 191 ntBASIC1.54□□□□□ -2.16
TTC9CQ8N5M4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.54□□□□□ -2.16
TTC9CQ8N5M4 AC123912.3-201ENST00000600907 1367 ntBASIC1.54□□□□□ -2.16
TTC9CQ8N5M4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
TTC9CQ8N5M4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.54□□□□□ -2.16
TTC9CQ8N5M4 MIR23A-201ENST00000385245 73 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 MIR493-201ENST00000385254 89 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 RPL17P12-201ENST00000413391 526 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 SEPT2P1-201ENST00000419651 180 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AL365496.1-201ENST00000426885 215 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AL160175.1-201ENST00000428124 247 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 TPTE2P6-202ENST00000445572 1007 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 ANXA2P1-201ENST00000505539 926 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 MIR4513-201ENST00000581077 86 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AL449363.1-201ENST00000617815 186 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 YWHAEP7-203ENST00000622054 312 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC097372.4-201ENST00000625025 466 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.53□□□□□ -2.16
TTC9CQ8N5M4 AC104454.1-201ENST00000421341 1401 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 MTND4P27-201ENST00000450813 1354 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 U8.2-201ENST00000363156 134 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RNU6-198P-201ENST00000384258 104 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RNU6-253P-201ENST00000384730 105 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RNA5SP56-201ENST00000410277 118 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AL358075.3-201ENST00000426289 226 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RPL7L1P10-201ENST00000427790 463 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 MTCYBP12-201ENST00000440559 1134 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 XKRY2-201ENST00000442362 1093 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RPL30P9-201ENST00000465586 330 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC104689.1-201ENST00000473356 768 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 RPL23AP41-201ENST00000484754 458 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 MTAPP1-201ENST00000489154 819 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC106872.3-201ENST00000495104 446 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC096571.1-202ENST00000506634 735 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 PRELID3BP4-201ENST00000515476 571 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC135628.1-201ENST00000568867 534 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 AC244517.12-201ENST00000623581 663 ntBASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.52□□□□□ -2.17
TTC9CQ8N5M4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 RNA5SP258-201ENST00000362750 119 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 RNU6-234P-201ENST00000365229 104 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 RNA5SP88-201ENST00000365560 109 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 MT-TC-201ENST00000387405 66 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 CYCSP45-201ENST00000402289 315 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC019129.1-201ENST00000403786 261 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 ARPC3P1-201ENST00000437218 533 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC004866.2-201ENST00000438285 481 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 ATG12P2-201ENST00000456830 416 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 PMCHL2-203ENST00000457791 237 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 RPL38P4-201ENST00000502376 214 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC006499.2-201ENST00000513470 337 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 SNORA31.23-201ENST00000517219 133 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC074029.2-201ENST00000551045 634 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AL669831.4-202ENST00000590817 238 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 ZNF92P3-201ENST00000596594 954 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 AC128687.1-201ENST00000605304 619 ntBASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC9CQ8N5M4 CCT4P2-201ENST00000233836 1548 ntBASIC1.5□□□□□ -2.17
TTC9CQ8N5M4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.5□□□□□ -2.17
TTC9CQ8N5M4 AC011477.1-204ENST00000623416 1325 ntBASIC1.5□□□□□ -2.17
TTC9CQ8N5M4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms