Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.58-201ENST00000362807 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.154-201ENST00000363624 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RNY4P16-201ENST00000364768 94 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RNY3P1-201ENST00000365085 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RNY3-201ENST00000365484 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 SNORA5A-201ENST00000384111 134 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.490-201ENST00000384413 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 U8.11-201ENST00000384699 133 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 U8.12-201ENST00000384701 133 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 MIR34B-201ENST00000385076 84 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AL356421.1-201ENST00000403255 413 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AL136116.1-201ENST00000403591 381 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AL162578.1-201ENST00000406202 378 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RNU2-9P-201ENST00000410194 145 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 ELOCP4-201ENST00000420090 333 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RBMY1KP-201ENST00000423480 476 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC006548.1-201ENST00000427470 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC005534.2-201ENST00000431047 433 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RPS11P1-201ENST00000451072 473 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 NANOGP10-201ENST00000453325 895 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 U8.18-201ENST00000459285 133 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 MTND5P5-201ENST00000503764 376 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC110768.1-201ENST00000509222 400 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 SCARNA24.1-201ENST00000516465 137 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 SNORD60.2-201ENST00000516883 86 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RNA5SP337-201ENST00000517007 109 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC023050.3-201ENST00000541142 333 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC011611.1-201ENST00000552179 197 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 OR4T1P-201ENST00000554933 911 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 MIR5684-201ENST00000585074 65 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AP001836.1-201ENST00000604675 523 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 CR381572.1-201ENST00000625098 102 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC087190.4-201ENST00000574616 8334 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 AC006020.1-201ENST00000420179 1854 ntBASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-223P-201ENST00000362830 107 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.162-201ENST00000363683 102 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.234-201ENST00000364409 97 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.419-201ENST00000384041 102 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-1226P-201ENST00000384317 107 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 MIR1-2-201ENST00000384961 85 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AL122016.1-201ENST00000403365 367 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RN7SKP32-201ENST00000410167 303 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RPL31P45-201ENST00000419532 356 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC099336.2-201ENST00000422457 254 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AL353678.1-201ENST00000422735 741 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AL590233.1-201ENST00000430017 456 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 NDUFA5P4-201ENST00000436704 385 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC099560.2-201ENST00000457554 255 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC006511.1-201ENST00000470614 315 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RPS26P28-201ENST00000470806 348 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC055855.1-201ENST00000489563 579 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RPL38P4-201ENST00000502376 214 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 SUB1P1-201ENST00000524415 382 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AP003072.1-201ENST00000531740 145 ntBASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.17□□□□□ -1.74
SLC44A3Q8N4M1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms