Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AP000756.2-201ENST00000624168 2567 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 U3.6-201ENST00000363622 211 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1035P-201ENST00000384477 107 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNA5SP91-201ENST00000390902 119 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNU6-918P-201ENST00000391219 106 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNA5SP56-201ENST00000410277 118 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC099336.2-201ENST00000422457 254 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AL592045.1-201ENST00000429867 352 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AL031659.1-201ENST00000447075 539 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 NUTF2P3-201ENST00000448540 384 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC099560.2-201ENST00000457554 255 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ACA64.1-201ENST00000459171 127 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC018638.3-201ENST00000461273 132 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC114781.3-201ENST00000512083 142 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1095P-201ENST00000516148 108 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC027288.2-201ENST00000553028 243 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 TRAV37-201ENST00000553906 342 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC011921.3-201ENST00000605540 361 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 BRDTP1-201ENST00000605735 677 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 AC139769.1-204ENST00000472297 1931 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 THAP12P5-201ENST00000405864 2275 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.44□□□□□ -1.54
CCDC116Q8IYX3 GVINP1-202ENST00000531871 7271 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC107027.3-201ENST00000565095 3473 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC087516.1-201ENST00000561236 2428 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RNA5SP500-201ENST00000364486 119 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RNU6-959P-201ENST00000384671 107 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1154P-201ENST00000391001 104 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RPL11P3-201ENST00000395256 523 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 GLULP6-201ENST00000399502 913 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RNU2-50P-201ENST00000410494 143 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 SNORD56-201ENST00000413522 71 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 BMS1P22-201ENST00000414726 313 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 TMSB10P2-201ENST00000416049 131 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 CYCSP10-201ENST00000417973 294 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 ANXA2P1-201ENST00000505539 926 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC126615.2-201ENST00000553003 515 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RPL21P7-201ENST00000557463 483 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 RPL23AP78-201ENST00000599928 470 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 BCORP1-203ENST00000513194 5093 ntBASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CCDC116Q8IYX3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms