Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU2-43P-201ENST00000410306 190 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 PIGPP2-201ENST00000411569 458 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC083875.1-201ENST00000419509 405 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 MTCO2P21-201ENST00000419780 677 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 BEND7P1-201ENST00000422058 457 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 BX119904.4-201ENST00000424402 301 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AL117351.1-201ENST00000438864 766 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 RPS12P18-201ENST00000442381 270 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AL591719.1-201ENST00000444669 744 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC016696.1-201ENST00000446949 318 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 RPS3AP43-201ENST00000479743 781 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 RNA5SP216-201ENST00000516111 123 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 SNORD59.2-201ENST00000516873 68 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 RNU6-528P-201ENST00000516926 100 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 SETP2-201ENST00000553886 926 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 BDH2P1-201ENST00000602288 736 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC090186.1-201ENST00000605991 572 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SKA3Q8IX90 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 MIR6733-201ENST00000635723 61 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SKA3Q8IX90 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.71□□□□□ -1.98
SKA3Q8IX90 FAM35BP-202ENST00000497389 3337 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 AC092435.3-201ENST00000565538 3654 ntBASIC2.71□□□□□ -1.98
SKA3Q8IX90 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL161781.1-201ENST00000354277 403 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 SNORD113-6-201ENST00000363345 75 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RNU6-744P-201ENST00000365557 107 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RNU6-1316P-201ENST00000384242 108 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RSL24D1P4-201ENST00000400938 484 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RPS15AP38-201ENST00000413110 372 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 THAP5P1-201ENST00000439089 262 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL121871.1-201ENST00000443413 436 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 PAXBP1P1-201ENST00000449315 447 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RPL23AP35-201ENST00000451906 501 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 RPS23P3-201ENST00000470993 430 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 MTND2P14-201ENST00000482139 351 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC104685.1-201ENST00000502445 371 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC147055.4-201ENST00000504399 745 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 GMPSP1-201ENST00000514075 579 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC026801.2-201ENST00000515352 425 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 SNORA31.8-201ENST00000516327 108 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC023538.1-201ENST00000534576 736 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC009097.3-201ENST00000563557 1018 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL353997.4-201ENST00000586196 166 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC013244.3-201ENST00000605614 388 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC106028.5-201ENST00000610332 395 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC079395.3-201ENST00000615161 484 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AL607023.1-201ENST00000620045 248 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC009039.2-201ENST00000624524 529 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 MIR3651-201ENST00000630427 90 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SKA3Q8IX90 AC087359.1-201ENST00000508335 1740 ntBASIC2.7□□□□□ -1.98
SKA3Q8IX90 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
SKA3Q8IX90 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.69□□□□□ -1.98
SKA3Q8IX90 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.69□□□□□ -1.98
SKA3Q8IX90 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SKA3Q8IX90 TAB3P1-202ENST00000452645 1634 ntBASIC2.69□□□□□ -1.98
SKA3Q8IX90 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms