Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AP001284.1-201ENST00000528393 2118 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AL078621.3-201ENST00000623707 2042 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 RNA5SP326-201ENST00000363209 110 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.353-201ENST00000365440 108 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 RNU6-339P-201ENST00000384310 107 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC005042.1-201ENST00000393397 800 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 CYB5AP4-201ENST00000396692 399 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.625-201ENST00000411256 107 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 ELOCP18-201ENST00000434209 337 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AL162725.1-201ENST00000435405 301 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 RPL37P6-202ENST00000464216 403 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.706-201ENST00000516933 99 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 MIR4675-201ENST00000577898 77 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AP000787.2-201ENST00000604432 568 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SCUBE3Q8IX30 AC004076.2-201ENST00000620532 3323 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 RNA5SP46-201ENST00000362370 120 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.82-201ENST00000363000 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.92-201ENST00000363043 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.235-201ENST00000364412 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.272-201ENST00000364696 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.275-201ENST00000364726 110 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.306-201ENST00000365015 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.312-201ENST00000365089 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.322-201ENST00000365151 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 SNORD116-18-201ENST00000383961 92 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 RNU6-44P-201ENST00000384045 107 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.534-201ENST00000384599 112 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC013442.1-201ENST00000397347 228 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 OR2AT2P-201ENST00000413438 905 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC113412.1-201ENST00000425840 504 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC073587.1-201ENST00000447093 876 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC079354.2-201ENST00000453523 154 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.650-201ENST00000459002 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 ANXA2P1-201ENST00000505539 926 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 RNU7-175P-201ENST00000515915 61 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 snoU109.6-201ENST00000516831 118 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.777-201ENST00000516982 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 MIR4311-201ENST00000580794 100 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.771-201ENST00000598668 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 BRDTP1-201ENST00000605735 677 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 SNORD113-5-201ENST00000607261 78 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 SNORD91B-202ENST00000608459 222 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 RMST_4.1-201ENST00000616886 107 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.789-201ENST00000622480 102 ntBASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.92□□□□□ -1.46
SCUBE3Q8IX30 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms