Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-462P-201ENST00000362659 105 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 Y_RNA.169-201ENST00000363745 96 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 RNA5SP88-201ENST00000365560 109 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 RNU6-723P-201ENST00000383973 107 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 MIR320C1-201ENST00000408566 88 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 VPS26BP1-201ENST00000417155 755 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 MTND1P26-201ENST00000440488 538 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 SSXP4-201ENST00000451349 245 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 ART2BP-201ENST00000453501 499 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 RNU7-125P-201ENST00000458760 62 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC072039.1-201ENST00000477611 581 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 LTV1P1-201ENST00000510683 1237 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC024589.1-201ENST00000512207 263 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 MRPS33P3-201ENST00000513456 322 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 RNA5SP216-201ENST00000516111 123 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 OR7K1P-201ENST00000546439 926 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC087481.2-201ENST00000565492 330 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC090615.1-201ENST00000577519 154 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC018638.7-201ENST00000605836 1114 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AL031667.3-201ENST00000620124 655 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 AC009039.2-201ENST00000624524 529 ntBASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC60Q8IWA6 AC021755.1-201ENST00000559747 1447 ntBASIC3.34□□□□□ -1.88
CCDC60Q8IWA6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC60Q8IWA6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 SRP72P2-201ENST00000344851 1979 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 RNU6-433P-201ENST00000363216 104 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 Y_RNA.302-201ENST00000364997 102 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 U3.26-201ENST00000391236 204 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL356131.1-201ENST00000405826 414 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 UBE2D3P1-201ENST00000436669 444 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL133217.1-201ENST00000450980 425 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL353691.1-201ENST00000451332 387 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 Z82190.1-201ENST00000454534 490 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 snoU13.8-201ENST00000458890 104 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 SETP7-201ENST00000552169 453 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC012435.1-202ENST00000568772 240 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC006254.3-201ENST00000603353 884 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL031176.1-201ENST00000604554 466 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC090186.1-201ENST00000605991 572 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AL596245.1-201ENST00000618994 362 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC019226.2-201ENST00000625973 424 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC011477.1-204ENST00000623416 1325 ntBASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC60Q8IWA6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC079780.1-201ENST00000428259 207 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms