Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 RPS3AP24-201ENST00000407896 734 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 MTND1P21-201ENST00000412991 285 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC090960.1-201ENST00000421072 306 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC026801.2-201ENST00000515352 425 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 SNORA67.7-201ENST00000516664 135 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AP001429.1-201ENST00000602568 530 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 HSPE1P7-201ENST00000604681 321 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC245389.1-201ENST00000605141 529 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC091965.4-201ENST00000607691 587 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC009268.2-201ENST00000621925 457 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AL034408.1-202ENST00000636088 415 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AC119674.1-207ENST00000641355 633 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 AP003122.5-201ENST00000527668 3766 ntBASIC3.32□□□□□ -1.88
NUP54Q7Z3B4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 MTND5P33-201ENST00000571250 1450 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 RNU5A-1-201ENST00000362698 116 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 RNA5SP252-201ENST00000391131 119 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 RPL7P8-201ENST00000411964 730 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC009518.2-201ENST00000418056 731 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 UBE2D3P4-201ENST00000441973 436 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 BMI1P1-201ENST00000445879 941 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 KATNBL1P6-201ENST00000453433 915 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AP002812.1-201ENST00000495378 474 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 DSTNP2-201ENST00000504533 515 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 Y_RNA.688-201ENST00000516565 95 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 ROCK1P1-201ENST00000573767 549 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC060771.1-201ENST00000582031 164 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC006116.10-201ENST00000591836 581 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL022161.1-201ENST00000604390 213 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 NUTF2P8-201ENST00000604593 363 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC006133.1-201ENST00000617106 264 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL159972.1-201ENST00000625150 448 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 AC099654.7-201ENST00000635788 2127 ntBASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP54Q7Z3B4 PABPC1P9-201ENST00000426076 1612 ntBASIC3.3□□□□□ -1.88
NUP54Q7Z3B4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP54Q7Z3B4 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.3□□□□□ -1.88
NUP54Q7Z3B4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP54Q7Z3B4 RNU5F-6P-201ENST00000362979 116 ntBASIC3.3□□□□□ -1.88
NUP54Q7Z3B4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms