Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC009296.1-201ENST00000443146 155 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC009237.7-201ENST00000447357 229 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 RPL12P39-201ENST00000455456 496 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 BX276092.8-201ENST00000455722 250 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 RN7SL790P-201ENST00000474043 298 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 RNU2-4P-201ENST00000606190 192 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.15-201ENST00000611544 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.16-201ENST00000613119 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.12-201ENST00000613778 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.9-201ENST00000615427 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.11-201ENST00000616345 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.2-201ENST00000616535 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.3-201ENST00000617785 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.19-201ENST00000618602 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 RNU2-1-201ENST00000618664 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.6-201ENST00000619225 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.5-201ENST00000619465 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 U2.10-201ENST00000620268 191 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC006001.4-201ENST00000622243 395 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 AC114774.1-201ENST00000507410 1770 ntBASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BLOC1S3Q6QNY0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 SAGE2P-201ENST00000420011 2126 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 SNORD14B-201ENST00000364533 90 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL357075.1-201ENST00000404107 726 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNA5SP156-201ENST00000410250 110 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-1025P-201ENST00000410629 104 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL513331.1-201ENST00000411908 397 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL158156.1-201ENST00000422509 473 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 CRIP1P1-201ENST00000427567 185 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 WARS2P1-201ENST00000429678 537 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL512844.2-201ENST00000433990 593 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 IFNA11P-201ENST00000446352 526 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AC002553.3-201ENST00000453002 341 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-1211P-201ENST00000459179 105 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AC114324.2-202ENST00000503812 134 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-1114P-201ENST00000516022 107 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNU7-121P-201ENST00000516604 62 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RN7SKP49-201ENST00000516675 260 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-567P-201ENST00000516746 107 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 KLKP1-201ENST00000595979 403 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 RMST_6.1-201ENST00000611980 203 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 LINC01109-201ENST00000603837 3081 ntBASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S3Q6QNY0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-428P-201ENST00000362942 107 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 RNA5SP197-201ENST00000363357 119 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 SNORD115-32-201ENST00000364079 82 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 RNU6-20P-201ENST00000384106 107 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 SNORD94-201ENST00000386037 137 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 RNY4P18-201ENST00000391107 89 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 ZNF37CP-201ENST00000406795 241 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
BLOC1S3Q6QNY0 MTATP6P4-201ENST00000427725 675 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms