Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 MTND5P16-201ENST00000460269 1703 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC010300.1-201ENST00000600671 5134 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 Y_RNA.146-201ENST00000363549 102 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 Y_RNA.167-201ENST00000363735 109 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 Y_RNA.197-201ENST00000364004 102 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 Y_RNA.378-201ENST00000365652 113 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RPL7P10-201ENST00000417407 739 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RPL12P46-201ENST00000436610 195 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AF228730.2-201ENST00000438784 848 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL162395.1-201ENST00000457882 422 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RPS27AP13-201ENST00000498403 237 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RNA5SP49-201ENST00000516450 115 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 RNU6-1092P-201ENST00000516955 87 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC109635.4-202ENST00000531666 412 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC024619.4-201ENST00000580924 316 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 MIR4293-201ENST00000584305 78 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC016925.2-201ENST00000605108 242 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 CTHRC1P1-201ENST00000605383 469 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL357559.1-201ENST00000622228 274 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AL136313.1-201ENST00000624804 202 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 AC093849.1-201ENST00000563631 2209 ntBASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AL672167.1-205ENST00000641112 3080 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RNU6-61P-201ENST00000365528 109 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RNU6-637P-201ENST00000384050 107 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RNU6-339P-201ENST00000384310 107 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 MIR554-201ENST00000384874 96 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 GPM6BP2-201ENST00000432046 144 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 GPM6BP1-201ENST00000446387 144 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 BX276092.4-201ENST00000452056 248 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AC135721.1-201ENST00000497954 479 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 MTCO3P44-201ENST00000510977 541 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RNU6-513P-201ENST00000516104 104 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RNU6-566P-201ENST00000516790 107 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 IMMP1LP2-201ENST00000552954 492 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 MIR3942-201ENST00000585264 109 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 Z98200.1-201ENST00000607298 470 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AP001642.1-201ENST00000624727 2117 ntBASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USPL1Q5W0Q7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AL137003.2-201ENST00000606924 2538 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 RNU6-1287P-201ENST00000362914 107 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 RNU6-1060P-201ENST00000384664 107 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 EIF4E2P1-201ENST00000393781 255 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 MIR921-201ENST00000401133 56 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 MIR548F5-201ENST00000408421 86 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 GNG5P5-201ENST00000420444 220 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 Z74021.1-201ENST00000423610 407 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC006946.1-201ENST00000429106 328 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC004801.2-202ENST00000463559 283 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 RNA5SP143-201ENST00000516936 115 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC090136.1-201ENST00000520009 240 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC022634.1-201ENST00000520765 532 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AP000763.2-201ENST00000540641 163 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 MIR4512-201ENST00000583257 77 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 MIR5690-201ENST00000583739 73 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 AC008737.2-201ENST00000599446 118 ntBASIC5.56□□□□□ -1.52
USPL1Q5W0Q7 XIAPP1-201ENST00000603162 600 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms