Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 DHFRP3-201ENST00000455595 559 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AL672167.3-201ENST00000465951 960 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 RN7SL354P-201ENST00000469282 294 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 RPL31P60-201ENST00000478450 367 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 RNU6-352P-201ENST00000516908 107 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AP001804.3-201ENST00000525146 880 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AP001646.1-201ENST00000527936 915 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AL512310.1-201ENST00000548639 172 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AC084783.1-201ENST00000565846 910 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AP001094.1-201ENST00000579805 193 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AP001330.5-201ENST00000607176 411 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AC068831.8-201ENST00000620171 435 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 ZNF680P1-201ENST00000436625 1469 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 AC010733.2-201ENST00000589496 5702 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 MTND5P17-201ENST00000418405 1603 ntBASIC4.02□□□□□ -1.77
RNF220Q5VTB9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RNF220Q5VTB9 ELF2P3-201ENST00000445099 1506 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC079741.1-201ENST00000321498 212 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RNU6-1322P-201ENST00000364309 107 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RNU4-12P-201ENST00000365233 139 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RNU6-946P-201ENST00000383878 107 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RNU6-606P-201ENST00000384721 111 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 MIR454-201ENST00000390180 115 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AL590383.1-201ENST00000428602 75 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RPS4XP4-201ENST00000443195 763 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 HMGN2P16-201ENST00000456802 261 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RPL35AP28-201ENST00000459730 331 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RN7SL610P-201ENST00000463845 291 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AF213884.2-201ENST00000510417 903 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AL117351.2-201ENST00000513571 157 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 SNORD27.1-201ENST00000516319 72 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 Y_RNA.693-201ENST00000516641 110 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AL512360.1-201ENST00000555346 234 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC051619.2-201ENST00000559063 397 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 HSPE1P5-201ENST00000561489 272 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC007448.1-201ENST00000582714 234 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 RPL12P25-202ENST00000598100 674 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC174048.1-201ENST00000603389 144 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 AC012409.3-201ENST00000611343 981 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.01□□□□□ -1.77
RNF220Q5VTB9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF220Q5VTB9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 RAD17P1-201ENST00000418130 2042 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 RNU4-48P-201ENST00000365559 182 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4□□□□□ -1.77
RNF220Q5VTB9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
RNF220Q5VTB9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RNF220Q5VTB9 SNORA37-201ENST00000384504 129 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 MIR129-1-201ENST00000384972 72 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 SNORD66.1-201ENST00000391230 76 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 CIR1P3-201ENST00000405137 479 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 RPL30P2-201ENST00000414021 291 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 SNRPFP1-201ENST00000414761 252 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 OR51A5P-201ENST00000415429 942 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC114491.1-201ENST00000416095 246 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 SDCBPP3-201ENST00000419629 891 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4□□□□□ -1.77
RNF220Q5VTB9 BNIP3P2-201ENST00000441221 577 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AL512326.1-201ENST00000443050 721 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4□□□□□ -1.77
RNF220Q5VTB9 RPL31P61-201ENST00000496160 376 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC231760.1-201ENST00000498002 260 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4□□□□□ -1.77
RNF220Q5VTB9 ARL2BPP6-201ENST00000512757 439 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 OR5AQ1P-201ENST00000527596 927 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 HIGD1AP5-201ENST00000529959 259 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms