Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 AC015813.6-201ENST00000624409 5808 ntBASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.45□□□□□ -1.54
COL13A1Q5TAT6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.152-201ENST00000363578 100 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RNU1-132P-201ENST00000364300 164 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RNU6-637P-201ENST00000384050 107 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.493-201ENST00000384422 102 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 SNORA70.10-201ENST00000384515 134 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RNU6-1109P-201ENST00000391187 107 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.594-201ENST00000410373 140 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC011998.1-201ENST00000433403 117 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RPS24P13-201ENST00000442520 397 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MRPL48P1-201ENST00000445390 636 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 RN7SL98P-201ENST00000462271 300 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC087854.1-201ENST00000519706 414 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 DEFB108D-201ENST00000527787 222 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AP000827.1-201ENST00000527814 258 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 ATP1B3P1-201ENST00000605365 821 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MAPK10-349ENST00000641767 3661 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 AC009093.8-201ENST00000641769 292 ntBASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL13A1Q5TAT6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 RNU6-238P-201ENST00000363313 106 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.389-201ENST00000383924 113 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.404-201ENST00000383978 102 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 RNU6-434P-201ENST00000384376 107 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.496-201ENST00000384444 101 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 RNU6-393P-201ENST00000384475 107 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 SNORD70.1-201ENST00000391007 85 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.645-201ENST00000391229 102 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC080125.1-201ENST00000414888 684 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 TMSB10P2-201ENST00000416049 131 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 USMG5P1-201ENST00000425964 177 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 DEFB109F-201ENST00000491870 277 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC104564.1-201ENST00000493028 407 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC021146.3-201ENST00000511911 260 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.670-201ENST00000516255 105 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC005899.2-201ENST00000584353 90 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 SNHG22-203ENST00000617833 660 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AC091925.2-201ENST00000625059 256 ntBASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms