Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX4Q06945 RNU2-53P-201ENST00000516257 147 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 RNU6-323P-201ENST00000521915 107 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AC131281.1-201ENST00000522984 164 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX4Q06945 DEFB108D-201ENST00000527787 222 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 FKBP1BP1-201ENST00000553366 325 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 AC011494.1-201ENST00000596454 237 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AL451044.1-201ENST00000604867 238 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 SNORD58B-201ENST00000607313 66 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AL161637.1-201ENST00000622380 412 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 MIR6810-201ENST00000622701 70 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AL606534.2-204ENST00000635008 178 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX4Q06945 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 SNORD62.1-201ENST00000362541 86 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RNU6-1284P-201ENST00000363701 100 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 Y_RNA.210-201ENST00000364161 110 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 RNU6-946P-201ENST00000383878 107 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 U3.29-201ENST00000391296 212 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RNU2-21P-201ENST00000410368 188 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RPL21P109-201ENST00000422213 475 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX4Q06945 HMGB1P9-201ENST00000429856 646 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX4Q06945 RPL23AP50-201ENST00000434149 455 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 MRPS18BP2-201ENST00000434310 759 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 HSFY6P-201ENST00000445573 403 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX4Q06945 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX4Q06945 AC008571.1-201ENST00000467232 300 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RN7SL432P-201ENST00000484057 298 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RN7SL346P-201ENST00000491561 294 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC026801.1-201ENST00000497178 464 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 VN1R104P-201ENST00000505115 1009 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX4Q06945 OR51K1P-201ENST00000510214 950 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC022616.4-201ENST00000522985 181 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC026371.1-201ENST00000551867 419 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX4Q06945 RPL23AP84-201ENST00000571193 464 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 RN7SL652P-201ENST00000577769 300 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX4Q06945 AC091925.2-201ENST00000625059 256 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 MIR7641-1-201ENST00000627518 61 ntBASIC5.09□□□□□ -1.59
SOX4Q06945 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX4Q06945 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX4Q06945 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX4Q06945 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 MTND5P7-201ENST00000413558 1798 ntBASIC5.09□□□□□ -1.6
SOX4Q06945 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SOX4Q06945 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX4Q06945 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX4Q06945 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SOX4Q06945 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 Y_RNA.39-201ENST00000362620 98 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 RNVU1-3-201ENST00000364313 161 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 RNU6-434P-201ENST00000384376 107 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 RNU6-306P-201ENST00000384617 107 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 RNU6-754P-201ENST00000391166 107 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AL590762.2-201ENST00000395798 571 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AL109755.1-201ENST00000401791 649 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AC016397.1-201ENST00000412463 242 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AC140479.3-201ENST00000418944 1126 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 AC104333.2-201ENST00000422630 192 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX4Q06945 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX4Q06945 BTF3P6-201ENST00000448054 499 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 AL353752.1-201ENST00000454946 260 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AC112492.4-201ENST00000456549 352 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX4Q06945 AC053481.1-201ENST00000467217 306 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 AP001086.1-201ENST00000494882 321 ntBASIC5.08□□□□□ -1.6
SOX4Q06945 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX4Q06945 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms