Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CBX1P83916 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CBX1P83916 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
CBX1P83916 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AC007327.1-201ENST00000447461 264 ntBASIC2.84□□□□□ -1.95
CBX1P83916 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.84□□□□□ -1.95
CBX1P83916 RNU6-420P-201ENST00000458780 107 ntBASIC2.84□□□□□ -1.95
CBX1P83916 RPL31P50-201ENST00000471002 296 ntBASIC2.84□□□□□ -1.95
CBX1P83916 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.84□□□□□ -1.95
CBX1P83916 RAC1P5-201ENST00000512182 576 ntBASIC2.84□□□□□ -1.95
CBX1P83916 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.84□□□□□ -1.95
CBX1P83916 RNU6-714P-201ENST00000516963 103 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.84□□□□□ -1.95
CBX1P83916 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.84□□□□□ -1.95
CBX1P83916 OR5B10P-201ENST00000532869 642 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.84□□□□□ -1.95
CBX1P83916 OR6C7P-201ENST00000547875 934 ntBASIC2.84□□□□□ -1.95
CBX1P83916 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.84□□□□□ -1.95
CBX1P83916 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.84□□□□□ -1.95
CBX1P83916 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.84□□□□□ -1.95
CBX1P83916 BNIP3P27-201ENST00000599991 412 ntBASIC2.84□□□□□ -1.95
CBX1P83916 U73023.1-201ENST00000603134 700 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AC013553.2-201ENST00000604244 589 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AC019159.1-201ENST00000605094 187 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AL133507.1-201ENST00000605269 557 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AL109618.2-201ENST00000605527 211 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AL161629.2-201ENST00000615347 275 ntBASIC2.84□□□□□ -1.95
CBX1P83916 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.84□□□□□ -1.95
CBX1P83916 OR5H6-203ENST00000642105 978 ntBASIC2.84□□□□□ -1.95
CBX1P83916 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CBX1P83916 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CBX1P83916 SDAD1P2-201ENST00000441308 2028 ntBASIC2.83□□□□□ -1.96
CBX1P83916 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CBX1P83916 RNA5SP124-201ENST00000362739 110 ntBASIC2.83□□□□□ -1.96
CBX1P83916 RNU6-198P-201ENST00000384258 104 ntBASIC2.83□□□□□ -1.96
CBX1P83916 MIR514A1-201ENST00000385133 98 ntBASIC2.83□□□□□ -1.96
CBX1P83916 MIR670-201ENST00000390142 98 ntBASIC2.83□□□□□ -1.96
CBX1P83916 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CBX1P83916 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.83□□□□□ -1.96
CBX1P83916 HMGN2P30-201ENST00000423237 256 ntBASIC2.83□□□□□ -1.96
CBX1P83916 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 USP9YP11-201ENST00000427537 717 ntBASIC2.83□□□□□ -1.96
CBX1P83916 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 OR4K11P-201ENST00000431829 904 ntBASIC2.83□□□□□ -1.96
CBX1P83916 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 AC002381.1-201ENST00000447049 280 ntBASIC2.83□□□□□ -1.96
CBX1P83916 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.83□□□□□ -1.96
CBX1P83916 AC092798.1-201ENST00000458542 409 ntBASIC2.83□□□□□ -1.96
CBX1P83916 SNORD121B-201ENST00000458838 81 ntBASIC2.83□□□□□ -1.96
CBX1P83916 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 RN7SKP157-201ENST00000516174 282 ntBASIC2.83□□□□□ -1.96
CBX1P83916 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.83□□□□□ -1.96
CBX1P83916 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.83□□□□□ -1.96
CBX1P83916 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.83□□□□□ -1.96
CBX1P83916 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.83□□□□□ -1.96
CBX1P83916 AMZ2P1-203ENST00000565833 850 ntBASIC2.83□□□□□ -1.96
CBX1P83916 MYL12BP1-201ENST00000569826 507 ntBASIC2.83□□□□□ -1.96
CBX1P83916 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.83□□□□□ -1.96
CBX1P83916 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.83□□□□□ -1.96
CBX1P83916 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
CBX1P83916 AF129408.1-201ENST00000608767 431 ntBASIC2.83□□□□□ -1.96
CBX1P83916 AC244258.1-201ENST00000637553 1071 ntBASIC2.83□□□□□ -1.96
CBX1P83916 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CBX1P83916 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
CBX1P83916 OR4G2P-202ENST00000641004 1759 ntBASIC2.82□□□□□ -1.96
CBX1P83916 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CBX1P83916 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CBX1P83916 AL161781.1-201ENST00000354277 403 ntBASIC2.82□□□□□ -1.96
CBX1P83916 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CBX1P83916 RNU6-359P-201ENST00000365466 108 ntBASIC2.82□□□□□ -1.96
CBX1P83916 SNORA36C-201ENST00000384289 132 ntBASIC2.82□□□□□ -1.96
CBX1P83916 MIR7-3-201ENST00000384898 110 ntBASIC2.82□□□□□ -1.96
CBX1P83916 TAF9BP1-201ENST00000396646 746 ntBASIC2.82□□□□□ -1.96
CBX1P83916 SYF2P2-201ENST00000417620 583 ntBASIC2.82□□□□□ -1.96
CBX1P83916 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.82□□□□□ -1.96
CBX1P83916 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.82□□□□□ -1.96
CBX1P83916 RPL7L1P10-201ENST00000427790 463 ntBASIC2.82□□□□□ -1.96
CBX1P83916 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.82□□□□□ -1.96
CBX1P83916 NANOGP2-201ENST00000435391 727 ntBASIC2.82□□□□□ -1.96
CBX1P83916 RNF2P1-201ENST00000442955 1010 ntBASIC2.82□□□□□ -1.96
CBX1P83916 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CBX1P83916 MTND2P24-201ENST00000453434 806 ntBASIC2.82□□□□□ -1.96
CBX1P83916 snoU13.28-201ENST00000459235 104 ntBASIC2.82□□□□□ -1.96
CBX1P83916 RN7SL601P-201ENST00000471221 293 ntBASIC2.82□□□□□ -1.96
CBX1P83916 DSTNP2-201ENST00000504533 515 ntBASIC2.82□□□□□ -1.96
CBX1P83916 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.82□□□□□ -1.96
CBX1P83916 TTC39CP1-201ENST00000512513 755 ntBASIC2.82□□□□□ -1.96
CBX1P83916 SCARNA15.2-201ENST00000516409 127 ntBASIC2.82□□□□□ -1.96
CBX1P83916 RNU6-1256P-201ENST00000516539 103 ntBASIC2.82□□□□□ -1.96
CBX1P83916 RNU6-928P-201ENST00000516876 104 ntBASIC2.82□□□□□ -1.96
CBX1P83916 DUXAP2-201ENST00000519198 589 ntBASIC2.82□□□□□ -1.96
CBX1P83916 COX6CP8-201ENST00000522620 226 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms