Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 AL133412.1-201ENST00000380194 2992 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
RAE1P78406 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.76□□□□□ -1.81
RAE1P78406 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 RNU6-1284P-201ENST00000363701 100 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNY3P3-201ENST00000363816 102 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNU6-335P-201ENST00000364563 113 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNU5E-4P-201ENST00000364931 120 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNU4-48P-201ENST00000365559 182 ntBASIC3.76□□□□□ -1.81
RAE1P78406 SNORD3H-201ENST00000384486 214 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNU6-882P-201ENST00000391025 103 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RNU2-36P-201ENST00000410361 191 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.76□□□□□ -1.81
RAE1P78406 RPL21P24-201ENST00000413752 448 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 MTCO3P12-201ENST00000416718 547 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AL356095.1-201ENST00000417217 199 ntBASIC3.76□□□□□ -1.81
RAE1P78406 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 ATP5HP2-201ENST00000433885 485 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC016691.1-201ENST00000441321 413 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 AC008481.1-201ENST00000463278 396 ntBASIC3.76□□□□□ -1.81
RAE1P78406 RPL23AP2-201ENST00000471227 466 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 NRON-201ENST00000517270 370 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 AC087369.1-201ENST00000520775 996 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.76□□□□□ -1.81
RAE1P78406 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.76□□□□□ -1.81
RAE1P78406 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 AC034105.3-201ENST00000565294 442 ntBASIC3.76□□□□□ -1.81
RAE1P78406 SNORD84-203ENST00000584275 78 ntBASIC3.76□□□□□ -1.81
RAE1P78406 NRBF2P5-201ENST00000603087 788 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AL121992.2-201ENST00000606262 256 ntBASIC3.76□□□□□ -1.81
RAE1P78406 MIR6867-201ENST00000610636 67 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AL450472.3-201ENST00000615578 367 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
RAE1P78406 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RAE1P78406 SNHG22-203ENST00000617833 660 ntBASIC3.76□□□□□ -1.81
RAE1P78406 FRG1KP-201ENST00000623592 341 ntBASIC3.76□□□□□ -1.81
RAE1P78406 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 CKAP2P1-201ENST00000555477 2049 ntBASIC3.76□□□□□ -1.81
RAE1P78406 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAE1P78406 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.76□□□□□ -1.81
RAE1P78406 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 LINC02471-203ENST00000641941 4752 ntBASIC3.75□□□□□ -1.81
RAE1P78406 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 Y_RNA.38-201ENST00000362617 102 ntBASIC3.75□□□□□ -1.81
RAE1P78406 RNU5E-6P-201ENST00000365574 115 ntBASIC3.75□□□□□ -1.81
RAE1P78406 Y_RNA.381-201ENST00000365666 102 ntBASIC3.75□□□□□ -1.81
RAE1P78406 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 MIR708-201ENST00000390708 88 ntBASIC3.75□□□□□ -1.81
RAE1P78406 RPL7AP73-201ENST00000413490 353 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 FAR2P4-202ENST00000425399 584 ntBASIC3.75□□□□□ -1.81
RAE1P78406 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 RPL36AP6-201ENST00000435770 321 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC090774.1-201ENST00000435925 246 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 AC004866.2-201ENST00000438285 481 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AL138799.3-201ENST00000438968 350 ntBASIC3.75□□□□□ -1.81
RAE1P78406 BNIP3P2-201ENST00000441221 577 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.75□□□□□ -1.81
RAE1P78406 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 RNU7-63P-201ENST00000459054 62 ntBASIC3.75□□□□□ -1.81
RAE1P78406 SNORD97-201ENST00000459187 142 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC026979.1-201ENST00000492525 396 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms