Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC073308.1-201ENST00000623696 305 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AP003399.1-201ENST00000637534 361 ntBASIC2.45□□□□□ -2.02
TPM4P67936 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TPM4P67936 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TPM4P67936 RNA5SP138-201ENST00000365098 114 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AL513331.1-201ENST00000411908 397 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM4P67936 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.44□□□□□ -2.02
TPM4P67936 AC092017.2-201ENST00000427600 362 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC092155.2-201ENST00000454675 477 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.44□□□□□ -2.02
TPM4P67936 AC090515.1-201ENST00000465295 476 ntBASIC2.44□□□□□ -2.02
TPM4P67936 RN7SL432P-201ENST00000484057 298 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC109464.2-201ENST00000510242 943 ntBASIC2.44□□□□□ -2.02
TPM4P67936 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.44□□□□□ -2.02
TPM4P67936 AC023824.2-201ENST00000566185 400 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
TPM4P67936 MIR4319-201ENST00000577285 85 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC015688.2-201ENST00000584523 262 ntBASIC2.44□□□□□ -2.02
TPM4P67936 RPS15AP11-201ENST00000594193 385 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AC103710.4-201ENST00000609301 899 ntBASIC2.44□□□□□ -2.02
TPM4P67936 VN1R74P-201ENST00000613259 503 ntBASIC2.44□□□□□ -2.02
TPM4P67936 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TPM4P67936 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TPM4P67936 AC022336.2-201ENST00000568966 2538 ntBASIC2.43□□□□□ -2.02
TPM4P67936 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.43□□□□□ -2.02
TPM4P67936 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TPM4P67936 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
TPM4P67936 SNORA51.6-201ENST00000384151 125 ntBASIC2.43□□□□□ -2.02
TPM4P67936 MIR23B-201ENST00000384832 97 ntBASIC2.43□□□□□ -2.02
TPM4P67936 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
TPM4P67936 RNU4-72P-201ENST00000410754 173 ntBASIC2.43□□□□□ -2.02
TPM4P67936 SDR42E1P3-201ENST00000438345 502 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AC092170.1-201ENST00000440211 356 ntBASIC2.43□□□□□ -2.02
TPM4P67936 PGBD4P3-201ENST00000440731 581 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.43□□□□□ -2.02
TPM4P67936 AL592447.1-201ENST00000447592 540 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AL139109.1-201ENST00000455491 297 ntBASIC2.43□□□□□ -2.02
TPM4P67936 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AC097462.2-201ENST00000504623 481 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AC091917.2-201ENST00000505002 744 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TPM4P67936 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TPM4P67936 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 GAS5-AS1-201ENST00000602767 694 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 APOOP1-201ENST00000604695 592 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 AC010872.1-201ENST00000624225 675 ntBASIC2.43□□□□□ -2.02
TPM4P67936 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 AC093591.3-201ENST00000634516 308 ntBASIC2.43□□□□□ -2.02
TPM4P67936 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.43□□□□□ -2.02
TPM4P67936 OR5H6-203ENST00000642105 978 ntBASIC2.43□□□□□ -2.02
TPM4P67936 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TPM4P67936 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TPM4P67936 GDI2P1-201ENST00000429312 1336 ntBASIC2.42□□□□□ -2.02
TPM4P67936 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TPM4P67936 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM4P67936 RN7SKP27-201ENST00000410684 333 ntBASIC2.42□□□□□ -2.02
TPM4P67936 HMGB1P11-201ENST00000413899 637 ntBASIC2.42□□□□□ -2.02
TPM4P67936 GTF2IP20-201ENST00000431663 360 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.42□□□□□ -2.02
TPM4P67936 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM4P67936 AL121871.1-201ENST00000443413 436 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.42□□□□□ -2.02
TPM4P67936 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TPM4P67936 AL021397.1-201ENST00000451806 248 ntBASIC2.42□□□□□ -2.02
TPM4P67936 MTND2P6-201ENST00000455337 1030 ntBASIC2.42□□□□□ -2.02
TPM4P67936 RPS3AP14-201ENST00000483907 780 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC008427.1-201ENST00000503102 655 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC011352.3-201ENST00000505162 593 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.42□□□□□ -2.02
TPM4P67936 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.42□□□□□ -2.02
TPM4P67936 RNU5A-7P-201ENST00000515979 116 ntBASIC2.42□□□□□ -2.02
TPM4P67936 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
TPM4P67936 SNORA70.24-201ENST00000517233 118 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM4P67936 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM4P67936 AC124293.1-201ENST00000530034 493 ntBASIC2.42□□□□□ -2.02
TPM4P67936 TRAV11-201ENST00000539512 339 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.42□□□□□ -2.02
TPM4P67936 MIR4448-201ENST00000584360 86 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
TPM4P67936 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.42□□□□□ -2.02
TPM4P67936 MIR7106-201ENST00000612419 65 ntBASIC2.42□□□□□ -2.02
TPM4P67936 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
TPM4P67936 AC090772.4-201ENST00000623599 362 ntBASIC2.42□□□□□ -2.02
TPM4P67936 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPM4P67936 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms