Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.83□□□□□ -2.28
RPL39P62891 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 AC022662.1-201ENST00000580252 331 ntBASIC0.83□□□□□ -2.28
RPL39P62891 AC024619.4-201ENST00000580924 316 ntBASIC0.83□□□□□ -2.28
RPL39P62891 LLPHP1-201ENST00000603571 367 ntBASIC0.83□□□□□ -2.28
RPL39P62891 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 AC243756.2-201ENST00000618406 463 ntBASIC0.83□□□□□ -2.28
RPL39P62891 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL39P62891 AC097655.1-201ENST00000635075 318 ntBASIC0.83□□□□□ -2.28
RPL39P62891 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RPL39P62891 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL39P62891 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL39P62891 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
RPL39P62891 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL39P62891 RNU6-1263P-201ENST00000384601 106 ntBASIC0.82□□□□□ -2.28
RPL39P62891 MIR634-201ENST00000385208 97 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AL590084.1-201ENST00000407885 387 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC244453.4-201ENST00000419150 388 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AL591704.2-201ENST00000421658 181 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC246680.2-201ENST00000422106 389 ntBASIC0.82□□□□□ -2.28
RPL39P62891 XKRYP1-201ENST00000423438 492 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL39P62891 AL353729.1-201ENST00000425044 720 ntBASIC0.82□□□□□ -2.28
RPL39P62891 SDAD1P3-201ENST00000427380 333 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC244035.1-201ENST00000430042 390 ntBASIC0.82□□□□□ -2.28
RPL39P62891 XKRYP2-201ENST00000432915 492 ntBASIC0.82□□□□□ -2.28
RPL39P62891 UBE2V1P13-201ENST00000436983 439 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RPL39P62891 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.82□□□□□ -2.28
RPL39P62891 AC005297.2-201ENST00000450430 606 ntBASIC0.82□□□□□ -2.28
RPL39P62891 RPL31P58-201ENST00000469001 379 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC087884.1-201ENST00000469738 328 ntBASIC0.82□□□□□ -2.28
RPL39P62891 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.82□□□□□ -2.28
RPL39P62891 TPT1P8-201ENST00000510120 555 ntBASIC0.82□□□□□ -2.28
RPL39P62891 RNU1-41P-201ENST00000516161 162 ntBASIC0.82□□□□□ -2.28
RPL39P62891 RNU1-48P-201ENST00000516400 162 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL39P62891 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RPL39P62891 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC0.82□□□□□ -2.28
RPL39P62891 AC018630.1-201ENST00000541376 925 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL39P62891 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC0.82□□□□□ -2.28
RPL39P62891 AP003117.2-201ENST00000606010 545 ntBASIC0.82□□□□□ -2.28
RPL39P62891 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.82□□□□□ -2.28
RPL39P62891 AC005296.1-201ENST00000616145 209 ntBASIC0.82□□□□□ -2.28
RPL39P62891 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.82□□□□□ -2.28
RPL39P62891 AC002543.1-201ENST00000299783 1954 ntBASIC0.82□□□□□ -2.28
RPL39P62891 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.82□□□□□ -2.28
RPL39P62891 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL39P62891 ZNF519P1-201ENST00000449011 1626 ntBASIC0.82□□□□□ -2.28
RPL39P62891 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC0.81□□□□□ -2.28
RPL39P62891 SNORA67.5-201ENST00000391036 107 ntBASIC0.81□□□□□ -2.28
RPL39P62891 RNA5SP354-201ENST00000391247 136 ntBASIC0.81□□□□□ -2.28
RPL39P62891 OR6C66P-201ENST00000414917 930 ntBASIC0.81□□□□□ -2.28
RPL39P62891 AC079780.1-201ENST00000428259 207 ntBASIC0.81□□□□□ -2.28
RPL39P62891 HMGB3P12-201ENST00000438745 556 ntBASIC0.81□□□□□ -2.28
RPL39P62891 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL39P62891 AC010099.1-201ENST00000455434 375 ntBASIC0.81□□□□□ -2.28
RPL39P62891 NF1P3-201ENST00000457709 450 ntBASIC0.81□□□□□ -2.28
RPL39P62891 SNORD97-201ENST00000459187 142 ntBASIC0.81□□□□□ -2.28
RPL39P62891 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL39P62891 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.81□□□□□ -2.28
RPL39P62891 MIR4285-201ENST00000581001 85 ntBASIC0.81□□□□□ -2.28
RPL39P62891 MIR4303-201ENST00000581299 66 ntBASIC0.81□□□□□ -2.28
RPL39P62891 MIR3660-201ENST00000584845 100 ntBASIC0.81□□□□□ -2.28
RPL39P62891 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.81□□□□□ -2.28
RPL39P62891 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.81□□□□□ -2.28
RPL39P62891 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC0.81□□□□□ -2.28
RPL39P62891 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.81□□□□□ -2.28
RPL39P62891 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPL39P62891 AL359893.1-201ENST00000447628 1580 ntBASIC0.8□□□□□ -2.28
RPL39P62891 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPL39P62891 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.8□□□□□ -2.28
RPL39P62891 AC092648.1-201ENST00000425870 423 ntBASIC0.8□□□□□ -2.28
RPL39P62891 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC0.8□□□□□ -2.28
RPL39P62891 AC236972.1-201ENST00000433225 199 ntBASIC0.8□□□□□ -2.28
RPL39P62891 MTND2P2-201ENST00000434633 945 ntBASIC0.8□□□□□ -2.28
RPL39P62891 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.8□□□□□ -2.28
RPL39P62891 MTCO1P48-201ENST00000448024 1096 ntBASIC0.8□□□□□ -2.28
RPL39P62891 AL500527.1-201ENST00000448532 255 ntBASIC0.8□□□□□ -2.28
RPL39P62891 AC008837.1-201ENST00000511513 412 ntBASIC0.8□□□□□ -2.28
RPL39P62891 AC119751.5-201ENST00000514077 770 ntBASIC0.8□□□□□ -2.28
RPL39P62891 RN7SKP34-201ENST00000516142 244 ntBASIC0.8□□□□□ -2.28
RPL39P62891 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.8□□□□□ -2.28
RPL39P62891 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPL39P62891 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
RPL39P62891 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPL39P62891 SEPT7P9-203ENST00000604116 343 ntBASIC0.8□□□□□ -2.28
RPL39P62891 SNORD14A-201ENST00000606526 91 ntBASIC0.8□□□□□ -2.28
RPL39P62891 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.8□□□□□ -2.28
RPL39P62891 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPL39P62891 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.79□□□□□ -2.28
RPL39P62891 RNA5SP139-201ENST00000364340 117 ntBASIC0.79□□□□□ -2.28
RPL39P62891 RNU4-91P-201ENST00000364778 135 ntBASIC0.79□□□□□ -2.28
RPL39P62891 Y_RNA.500-201ENST00000384466 111 ntBASIC0.79□□□□□ -2.28
RPL39P62891 MIR513A1-201ENST00000385138 129 ntBASIC0.79□□□□□ -2.28
RPL39P62891 AC003685.2-201ENST00000422795 395 ntBASIC0.79□□□□□ -2.28
RPL39P62891 Z80107.1-201ENST00000436830 412 ntBASIC0.79□□□□□ -2.28
RPL39P62891 OSTCP8-201ENST00000445117 448 ntBASIC0.79□□□□□ -2.28
RPL39P62891 HMGB1P15-201ENST00000453854 435 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms