Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.16□□□□□ -1.9
PEX3P56589 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
PEX3P56589 SNORA18.3-201ENST00000384122 132 ntBASIC3.16□□□□□ -1.9
PEX3P56589 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC092447.6-201ENST00000414578 210 ntBASIC3.16□□□□□ -1.9
PEX3P56589 EI24P1-201ENST00000416584 867 ntBASIC3.16□□□□□ -1.9
PEX3P56589 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.16□□□□□ -1.9
PEX3P56589 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC011233.1-201ENST00000422812 283 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AL593851.1-201ENST00000426171 157 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MTCYBP45-201ENST00000435243 565 ntBASIC3.16□□□□□ -1.9
PEX3P56589 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 UBE2D3P1-201ENST00000436669 444 ntBASIC3.16□□□□□ -1.9
PEX3P56589 HMGN2P20-201ENST00000437531 273 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MTND5P2-201ENST00000442927 1142 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AL353691.1-201ENST00000451332 387 ntBASIC3.16□□□□□ -1.9
PEX3P56589 NIPA2P5-201ENST00000452282 464 ntBASIC3.16□□□□□ -1.9
PEX3P56589 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MEMO1P3-201ENST00000459811 302 ntBASIC3.16□□□□□ -1.9
PEX3P56589 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
PEX3P56589 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.16□□□□□ -1.9
PEX3P56589 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.16□□□□□ -1.9
PEX3P56589 AC093281.2-201ENST00000510153 597 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.16□□□□□ -1.9
PEX3P56589 AC022861.1-201ENST00000522981 663 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MTCYBP41-201ENST00000528913 1123 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.16□□□□□ -1.9
PEX3P56589 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.16□□□□□ -1.9
PEX3P56589 SETP7-201ENST00000552169 453 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.16□□□□□ -1.9
PEX3P56589 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC021171.1-201ENST00000603137 706 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC106791.2-201ENST00000604680 391 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC010738.1-201ENST00000604970 987 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC072039.2-201ENST00000608883 439 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AL353748.2-201ENST00000622148 471 ntBASIC3.16□□□□□ -1.9
PEX3P56589 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.16□□□□□ -1.9
PEX3P56589 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
PEX3P56589 AC103706.2-201ENST00000638080 240 ntBASIC3.16□□□□□ -1.9
PEX3P56589 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PEX3P56589 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.16□□□□□ -1.9
PEX3P56589 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PEX3P56589 RNU6-462P-201ENST00000362659 105 ntBASIC3.15□□□□□ -1.91
PEX3P56589 RNU6-1249P-201ENST00000363237 111 ntBASIC3.15□□□□□ -1.91
PEX3P56589 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 Y_RNA.548-201ENST00000384656 105 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AL590084.2-201ENST00000401481 382 ntBASIC3.15□□□□□ -1.91
PEX3P56589 NDUFB4P4-201ENST00000404822 243 ntBASIC3.15□□□□□ -1.91
PEX3P56589 RNU6-712P-201ENST00000410558 100 ntBASIC3.15□□□□□ -1.91
PEX3P56589 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
PEX3P56589 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
PEX3P56589 RPL21P40-201ENST00000428586 483 ntBASIC3.15□□□□□ -1.91
PEX3P56589 MTATP6P17-201ENST00000431030 672 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AL354941.1-201ENST00000438600 464 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 MTCO1P27-201ENST00000448269 226 ntBASIC3.15□□□□□ -1.91
PEX3P56589 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.15□□□□□ -1.91
PEX3P56589 RPS24P6-201ENST00000452670 400 ntBASIC3.15□□□□□ -1.91
PEX3P56589 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.15□□□□□ -1.91
PEX3P56589 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 RPS3AP22-201ENST00000488297 769 ntBASIC3.15□□□□□ -1.91
PEX3P56589 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
PEX3P56589 MRPS33P3-201ENST00000513456 322 ntBASIC3.15□□□□□ -1.91
PEX3P56589 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AP004371.1-201ENST00000525240 214 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 CYCSP39-201ENST00000565821 309 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AL353997.4-201ENST00000586196 166 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC024153.1-201ENST00000603103 365 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC012669.1-201ENST00000603209 283 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC011468.4-201ENST00000603942 409 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.15□□□□□ -1.91
PEX3P56589 AL607023.1-201ENST00000620045 248 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC079416.3-201ENST00000624479 549 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AC079228.1-201ENST00000624774 1049 ntBASIC3.15□□□□□ -1.91
PEX3P56589 AL356473.1-201ENST00000406203 1408 ntBASIC3.15□□□□□ -1.91
PEX3P56589 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.15□□□□□ -1.91
PEX3P56589 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.15□□□□□ -1.91
PEX3P56589 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PEX3P56589 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PEX3P56589 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.14□□□□□ -1.91
PEX3P56589 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
PEX3P56589 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PEX3P56589 AL031679.1-201ENST00000400616 525 ntBASIC3.14□□□□□ -1.91
PEX3P56589 AL049545.1-201ENST00000401856 572 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms