Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
LIM2P55344 AC007256.1-201ENST00000392253 2765 ntBASIC2.78□□□□□ -1.97
LIM2P55344 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.77□□□□□ -1.97
LIM2P55344 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
LIM2P55344 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 RNU1-140P-201ENST00000365040 165 ntBASIC2.77□□□□□ -1.97
LIM2P55344 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 MIR181B1-201ENST00000385240 110 ntBASIC2.77□□□□□ -1.97
LIM2P55344 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 U3.42-201ENST00000408746 214 ntBASIC2.77□□□□□ -1.97
LIM2P55344 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
LIM2P55344 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 MTATP6P4-201ENST00000427725 675 ntBASIC2.77□□□□□ -1.97
LIM2P55344 ARF4P2-201ENST00000430209 526 ntBASIC2.77□□□□□ -1.97
LIM2P55344 SNRPEP4-201ENST00000435815 279 ntBASIC2.77□□□□□ -1.97
LIM2P55344 YWHAZP7-201ENST00000436906 631 ntBASIC2.77□□□□□ -1.97
LIM2P55344 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.77□□□□□ -1.97
LIM2P55344 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 MTCO1P27-201ENST00000448269 226 ntBASIC2.77□□□□□ -1.97
LIM2P55344 MTND1P31-201ENST00000449206 961 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AL162389.1-201ENST00000449233 177 ntBASIC2.77□□□□□ -1.97
LIM2P55344 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
LIM2P55344 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AL049830.2-201ENST00000480072 201 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AC021382.1-201ENST00000483523 359 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.77□□□□□ -1.97
LIM2P55344 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.77□□□□□ -1.97
LIM2P55344 AC093281.2-201ENST00000510153 597 ntBASIC2.77□□□□□ -1.97
LIM2P55344 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.77□□□□□ -1.97
LIM2P55344 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.77□□□□□ -1.97
LIM2P55344 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.77□□□□□ -1.97
LIM2P55344 AC234772.3-201ENST00000602277 528 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AL109653.1-201ENST00000603091 248 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AP002826.1-201ENST00000608835 315 ntBASIC2.77□□□□□ -1.97
LIM2P55344 AL590099.1-201ENST00000615276 138 ntBASIC2.77□□□□□ -1.97
LIM2P55344 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.77□□□□□ -1.97
LIM2P55344 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIM2P55344 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIM2P55344 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.76□□□□□ -1.97
LIM2P55344 RNU6-97P-201ENST00000363387 104 ntBASIC2.76□□□□□ -1.97
LIM2P55344 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
LIM2P55344 PIGPP2-201ENST00000411569 458 ntBASIC2.76□□□□□ -1.97
LIM2P55344 MTND1P21-201ENST00000412991 285 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AL008987.1-201ENST00000415528 237 ntBASIC2.76□□□□□ -1.97
LIM2P55344 HIGD1AP15-201ENST00000416198 280 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 AC233728.2-201ENST00000425348 757 ntBASIC2.76□□□□□ -1.97
LIM2P55344 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.76□□□□□ -1.97
LIM2P55344 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 RPS29P6-201ENST00000438196 145 ntBASIC2.76□□□□□ -1.97
LIM2P55344 RABEPKP1-201ENST00000440529 1026 ntBASIC2.76□□□□□ -1.97
LIM2P55344 CYCSP32-201ENST00000440548 321 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 RAC1P7-201ENST00000445367 377 ntBASIC2.76□□□□□ -1.97
LIM2P55344 RPL37P4-201ENST00000448908 268 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC140076.1-201ENST00000449897 361 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC234775.1-201ENST00000454247 670 ntBASIC2.76□□□□□ -1.97
LIM2P55344 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.76□□□□□ -1.97
LIM2P55344 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 AC034222.1-201ENST00000494052 532 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC091951.3-201ENST00000504093 246 ntBASIC2.76□□□□□ -1.97
LIM2P55344 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LIM2P55344 RPL12P22-201ENST00000519073 490 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC068587.4-201ENST00000533893 186 ntBASIC2.76□□□□□ -1.97
LIM2P55344 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.76□□□□□ -1.97
LIM2P55344 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.76□□□□□ -1.97
LIM2P55344 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
LIM2P55344 AC022080.3-201ENST00000544433 482 ntBASIC2.76□□□□□ -1.97
LIM2P55344 SETP2-201ENST00000553886 926 ntBASIC2.76□□□□□ -1.97
LIM2P55344 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.76□□□□□ -1.97
LIM2P55344 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.76□□□□□ -1.97
LIM2P55344 AC012119.1-201ENST00000603184 222 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC013244.3-201ENST00000605614 388 ntBASIC2.76□□□□□ -1.97
LIM2P55344 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.76□□□□□ -1.97
LIM2P55344 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.76□□□□□ -1.97
LIM2P55344 MTCO1P9-201ENST00000505577 1534 ntBASIC2.76□□□□□ -1.97
LIM2P55344 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
LIM2P55344 SNORA48.2-201ENST00000390926 124 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.75□□□□□ -1.97
LIM2P55344 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
LIM2P55344 MTCO2P17-201ENST00000424336 677 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.75□□□□□ -1.97
LIM2P55344 RPL23AP83-201ENST00000434984 473 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.75□□□□□ -1.97
LIM2P55344 RPL23AP35-201ENST00000451906 501 ntBASIC2.75□□□□□ -1.97
LIM2P55344 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.75□□□□□ -1.97
LIM2P55344 AC108860.1-201ENST00000484521 383 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms