Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NUP98P52948 AC109780.2-201ENST00000413467 845 ntBASIC2.09□□□□□ -2.08
NUP98P52948 AC108157.1-201ENST00000510511 539 ntBASIC2.09□□□□□ -2.08
NUP98P52948 FABP5P6-201ENST00000510588 409 ntBASIC2.09□□□□□ -2.08
NUP98P52948 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.09□□□□□ -2.08
NUP98P52948 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.09□□□□□ -2.08
NUP98P52948 AC008687.2-201ENST00000597865 520 ntBASIC2.09□□□□□ -2.08
NUP98P52948 AC068831.7-201ENST00000616954 363 ntBASIC2.09□□□□□ -2.08
NUP98P52948 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.09□□□□□ -2.08
NUP98P52948 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.09□□□□□ -2.08
NUP98P52948 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NUP98P52948 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
NUP98P52948 SNORA14A-201ENST00000364773 135 ntBASIC2.08□□□□□ -2.08
NUP98P52948 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
NUP98P52948 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP98P52948 RPS26P56-201ENST00000444468 240 ntBASIC2.08□□□□□ -2.08
NUP98P52948 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP98P52948 MTCO3P24-201ENST00000572729 782 ntBASIC2.08□□□□□ -2.08
NUP98P52948 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
NUP98P52948 AC131280.1-202ENST00000624067 4211 ntBASIC2.08□□□□□ -2.08
NUP98P52948 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUP98P52948 MTATP6P31-201ENST00000406985 692 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.07□□□□□ -2.08
NUP98P52948 FO393419.3-201ENST00000428741 282 ntBASIC2.07□□□□□ -2.08
NUP98P52948 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.07□□□□□ -2.08
NUP98P52948 snoU13.3-201ENST00000459441 104 ntBASIC2.07□□□□□ -2.08
NUP98P52948 RNF138P1-201ENST00000502765 546 ntBASIC2.07□□□□□ -2.08
NUP98P52948 KATNBL1P4-201ENST00000503545 918 ntBASIC2.07□□□□□ -2.08
NUP98P52948 SNORA31.8-201ENST00000516327 108 ntBASIC2.07□□□□□ -2.08
NUP98P52948 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.07□□□□□ -2.08
NUP98P52948 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP98P52948 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP98P52948 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.6-201ENST00000603753 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.11-201ENST00000604059 253 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.10-201ENST00000604330 253 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AC008162.1-201ENST00000604718 254 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.1-201ENST00000604752 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.2-201ENST00000604983 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.5-201ENST00000605253 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.4-201ENST00000605279 254 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.12-201ENST00000605291 253 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.8-201ENST00000605353 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.9-201ENST00000605428 253 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AC138473.1-201ENST00000605717 526 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL670379.7-201ENST00000605823 252 ntBASIC2.07□□□□□ -2.08
NUP98P52948 BX248123.2-201ENST00000606318 124 ntBASIC2.07□□□□□ -2.08
NUP98P52948 MIR7111-201ENST00000619751 72 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AC090617.7-201ENST00000623952 126 ntBASIC2.07□□□□□ -2.08
NUP98P52948 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUP98P52948 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUP98P52948 AC080128.1-201ENST00000474389 1917 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP98P52948 SSXP9-201ENST00000417503 292 ntBASIC2.07□□□□□ -2.08
NUP98P52948 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP98P52948 YWHAZP8-201ENST00000436935 731 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.07□□□□□ -2.08
NUP98P52948 AL109741.2-201ENST00000455561 343 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.07□□□□□ -2.08
NUP98P52948 AC079203.1-201ENST00000487972 404 ntBASIC2.07□□□□□ -2.08
NUP98P52948 SUMO1P1-201ENST00000497904 306 ntBASIC2.07□□□□□ -2.08
NUP98P52948 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.07□□□□□ -2.08
NUP98P52948 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP98P52948 AC004923.2-201ENST00000529649 369 ntBASIC2.07□□□□□ -2.08
NUP98P52948 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.07□□□□□ -2.08
NUP98P52948 AL645939.4-201ENST00000604495 135 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL359821.1-201ENST00000605519 182 ntBASIC2.07□□□□□ -2.08
NUP98P52948 AL589994.2-201ENST00000621124 579 ntBASIC2.07□□□□□ -2.08
NUP98P52948 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NUP98P52948 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP98P52948 RNA5SP139-201ENST00000364340 117 ntBASIC2.06□□□□□ -2.08
NUP98P52948 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
NUP98P52948 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP98P52948 MIR1303-201ENST00000408625 86 ntBASIC2.06□□□□□ -2.08
NUP98P52948 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP98P52948 XKRYP6-201ENST00000440468 1116 ntBASIC2.06□□□□□ -2.08
NUP98P52948 XKRYP3-201ENST00000442113 1116 ntBASIC2.06□□□□□ -2.08
NUP98P52948 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.06□□□□□ -2.08
NUP98P52948 AL034418.1-201ENST00000448675 860 ntBASIC2.06□□□□□ -2.08
NUP98P52948 AC087879.1-201ENST00000474343 374 ntBASIC2.06□□□□□ -2.08
NUP98P52948 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
NUP98P52948 HMGB1P22-201ENST00000505315 124 ntBASIC2.06□□□□□ -2.08
NUP98P52948 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP98P52948 AC022616.2-201ENST00000523185 300 ntBASIC2.06□□□□□ -2.08
NUP98P52948 OR10V3P-201ENST00000525712 725 ntBASIC2.06□□□□□ -2.08
NUP98P52948 ARL2BPP2-201ENST00000550907 489 ntBASIC2.06□□□□□ -2.08
NUP98P52948 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.06□□□□□ -2.08
NUP98P52948 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.06□□□□□ -2.08
NUP98P52948 AC115989.2-201ENST00000578640 563 ntBASIC2.06□□□□□ -2.08
NUP98P52948 AL355810.1-201ENST00000614629 552 ntBASIC2.06□□□□□ -2.08
NUP98P52948 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP98P52948 ZNF876P-202ENST00000398732 1485 ntBASIC2.06□□□□□ -2.08
NUP98P52948 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP98P52948 VTRNA1-1-201ENST00000363120 99 ntBASIC2.05□□□□□ -2.08
NUP98P52948 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
NUP98P52948 RPS7P9-201ENST00000414704 586 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP98P52948 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.05□□□□□ -2.08
NUP98P52948 RPS29P20-201ENST00000489592 171 ntBASIC2.05□□□□□ -2.08
NUP98P52948 IGKV2D-36-201ENST00000518643 226 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms