Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ZNF37BP-203ENST00000452306 1352 ntBASIC3.04□□□□□ -1.92
MSH6P52701 MIR337-201ENST00000362281 93 ntBASIC3.04□□□□□ -1.92
MSH6P52701 SNORA63.3-201ENST00000362682 132 ntBASIC3.04□□□□□ -1.92
MSH6P52701 RN7SKP226-201ENST00000364912 300 ntBASIC3.04□□□□□ -1.92
MSH6P52701 MIR649-201ENST00000384843 97 ntBASIC3.04□□□□□ -1.92
MSH6P52701 MTCO2P31-201ENST00000402702 684 ntBASIC3.04□□□□□ -1.92
MSH6P52701 FGF7P8-201ENST00000402994 292 ntBASIC3.04□□□□□ -1.92
MSH6P52701 MTATP6P19-201ENST00000413797 659 ntBASIC3.04□□□□□ -1.92
MSH6P52701 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH6P52701 TAF13P2-201ENST00000416876 286 ntBASIC3.04□□□□□ -1.92
MSH6P52701 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH6P52701 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.04□□□□□ -1.92
MSH6P52701 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH6P52701 AL445646.1-201ENST00000431784 216 ntBASIC3.04□□□□□ -1.92
MSH6P52701 OR4K11P-201ENST00000431829 904 ntBASIC3.04□□□□□ -1.92
MSH6P52701 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH6P52701 MTND4LP22-201ENST00000508209 276 ntBASIC3.04□□□□□ -1.92
MSH6P52701 AP000790.1-201ENST00000528891 737 ntBASIC3.04□□□□□ -1.92
MSH6P52701 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH6P52701 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH6P52701 MIR4474-201ENST00000579189 78 ntBASIC3.04□□□□□ -1.92
MSH6P52701 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH6P52701 MTATP6P2-201ENST00000603319 678 ntBASIC3.04□□□□□ -1.92
MSH6P52701 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MSH6P52701 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH6P52701 AP000943.4-201ENST00000622912 357 ntBASIC3.04□□□□□ -1.92
MSH6P52701 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
MSH6P52701 API5P2-201ENST00000397055 1498 ntBASIC3.04□□□□□ -1.92
MSH6P52701 MTND4P34-201ENST00000572715 1371 ntBASIC3.04□□□□□ -1.92
MSH6P52701 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
MSH6P52701 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
MSH6P52701 MIR21-201ENST00000362134 72 ntBASIC3.03□□□□□ -1.92
MSH6P52701 RNU5B-1-201ENST00000363286 116 ntBASIC3.03□□□□□ -1.92
MSH6P52701 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSH6P52701 RNU2-2P-201ENST00000410396 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 RNU6-575P-201ENST00000411326 105 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH6P52701 EI24P1-201ENST00000416584 867 ntBASIC3.03□□□□□ -1.92
MSH6P52701 NDUFB4P6-201ENST00000436819 366 ntBASIC3.03□□□□□ -1.92
MSH6P52701 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH6P52701 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH6P52701 MTCO3P27-201ENST00000514397 196 ntBASIC3.03□□□□□ -1.92
MSH6P52701 RNU6-826P-201ENST00000516827 104 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AC126177.3-201ENST00000551839 688 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH6P52701 MIR3670-2-201ENST00000582974 65 ntBASIC3.03□□□□□ -1.92
MSH6P52701 MIR3670-1-201ENST00000584160 65 ntBASIC3.03□□□□□ -1.92
MSH6P52701 MIR3670-3-201ENST00000584855 65 ntBASIC3.03□□□□□ -1.92
MSH6P52701 SNRPGP15-201ENST00000600149 222 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH6P52701 RPAP2P1-201ENST00000603626 1168 ntBASIC3.03□□□□□ -1.92
MSH6P52701 AC002487.1-201ENST00000604565 994 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.15-201ENST00000611544 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 MIR3670-4-201ENST00000612260 65 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.16-201ENST00000613119 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 VN1R74P-201ENST00000613259 503 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.12-201ENST00000613778 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.20-201ENST00000613956 192 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.9-201ENST00000615427 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.11-201ENST00000616345 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.2-201ENST00000616535 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.3-201ENST00000617785 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.19-201ENST00000618602 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 RNU2-1-201ENST00000618664 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.6-201ENST00000619225 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.5-201ENST00000619465 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 U2.10-201ENST00000620268 191 ntBASIC3.03□□□□□ -1.92
MSH6P52701 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.03□□□□□ -1.92
MSH6P52701 AC010297.1-201ENST00000623948 149 ntBASIC3.03□□□□□ -1.92
MSH6P52701 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.03□□□□□ -1.92
MSH6P52701 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MSH6P52701 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH6P52701 AP005901.5-201ENST00000545779 1796 ntBASIC3.03□□□□□ -1.92
MSH6P52701 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSH6P52701 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSH6P52701 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH6P52701 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
MSH6P52701 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
MSH6P52701 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
MSH6P52701 RNU6-921P-201ENST00000384361 107 ntBASIC3.02□□□□□ -1.93
MSH6P52701 MIR499A-201ENST00000384903 122 ntBASIC3.02□□□□□ -1.93
MSH6P52701 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH6P52701 AC092638.1-201ENST00000411966 1275 ntBASIC3.02□□□□□ -1.93
MSH6P52701 LUZP4P1-201ENST00000415420 344 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH6P52701 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH6P52701 AC233279.1-201ENST00000455300 423 ntBASIC3.02□□□□□ -1.93
MSH6P52701 TRBV26-201ENST00000456572 344 ntBASIC3.02□□□□□ -1.93
MSH6P52701 HMGN2P16-201ENST00000456802 261 ntBASIC3.02□□□□□ -1.93
MSH6P52701 snoU13.3-201ENST00000459441 104 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AC006483.1-201ENST00000487308 313 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.02□□□□□ -1.93
MSH6P52701 NAMPTP2-201ENST00000505629 1115 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AC091860.1-201ENST00000505723 432 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AC109471.1-201ENST00000511631 612 ntBASIC3.02□□□□□ -1.93
MSH6P52701 AC025881.1-201ENST00000518851 512 ntBASIC3.02□□□□□ -1.93
MSH6P52701 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.02□□□□□ -1.93
MSH6P52701 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH6P52701 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms