Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BRCC3P46736 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BRCC3P46736 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCC3P46736 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 U3.11-201ENST00000364476 212 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 RNU6-343P-201ENST00000364709 104 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 RNU6-1122P-201ENST00000384449 107 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 U3.42-201ENST00000408746 214 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 RNU2-15P-201ENST00000410692 191 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
BRCC3P46736 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 MTCYBP38-201ENST00000417160 1123 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 TXNL1P1-201ENST00000429528 554 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 MTND4LP10-201ENST00000435146 291 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 HIGD1AP11-201ENST00000438361 280 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AL117351.1-201ENST00000438864 766 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.1□□□□□ -1.91
BRCC3P46736 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC098826.2-201ENST00000452011 651 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 RPS27AP1-201ENST00000475545 471 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC090453.1-201ENST00000495560 436 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 LTV1P1-201ENST00000510683 1237 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC026412.2-201ENST00000512270 1075 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 SNORA3.4-201ENST00000515969 96 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 RNU6-1095P-201ENST00000516148 108 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 RNA5SP468-201ENST00000516782 93 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC079600.2-201ENST00000550076 130 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC009712.1-201ENST00000564938 316 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC145350.1-201ENST00000567426 208 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.1□□□□□ -1.91
BRCC3P46736 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.1□□□□□ -1.91
BRCC3P46736 AL133507.1-201ENST00000605269 557 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC112220.3-201ENST00000605502 502 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC018755.4-201ENST00000619715 454 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC091304.6-201ENST00000619761 202 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AL590240.3-201ENST00000621416 943 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 AC097714.1-201ENST00000511272 1647 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
BRCC3P46736 AC005539.1-201ENST00000443768 1479 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRCC3P46736 RNU6-931P-201ENST00000363850 107 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 SNORA4.1-201ENST00000364263 144 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 RNU6-777P-201ENST00000364265 104 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 SNORA9.2-201ENST00000365361 133 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 RNU6-952P-201ENST00000391164 108 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 USP9YP33-201ENST00000412220 421 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 RPL7P46-201ENST00000425129 740 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 PSMA6P3-201ENST00000428242 164 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 RPS20P5-201ENST00000434808 360 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 USP9YP35-201ENST00000435696 412 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 UBE2D3P1-201ENST00000436669 444 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 MTND4P6-201ENST00000438297 472 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.09□□□□□ -1.91
BRCC3P46736 MTCYBP3-201ENST00000445588 1137 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.09□□□□□ -1.91
BRCC3P46736 ART2BP-201ENST00000453501 499 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 AL109741.2-201ENST00000455561 343 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 RNU7-136P-201ENST00000458819 69 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 snoU13.4-201ENST00000458916 104 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.09□□□□□ -1.91
BRCC3P46736 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 AC093281.2-201ENST00000510153 597 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AC010265.1-201ENST00000513509 211 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 MTCO2P32-201ENST00000514865 403 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 COX6CP8-201ENST00000522620 226 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BRCC3P46736 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.09□□□□□ -1.91
BRCC3P46736 AL163153.1-201ENST00000554223 283 ntBASIC3.09□□□□□ -1.91
BRCC3P46736 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.09□□□□□ -1.91
BRCC3P46736 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRCC3P46736 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.09□□□□□ -1.91
BRCC3P46736 AC012669.1-201ENST00000603209 283 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms