Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.62□□□□□ -1.99
TNFSF9P41273 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AC026436.1-201ENST00000510537 270 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 RAC1P5-201ENST00000512182 576 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.62□□□□□ -1.99
TNFSF9P41273 RNU6-56P-201ENST00000516986 93 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 HMGB1P41-201ENST00000520234 440 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
TNFSF9P41273 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFSF9P41273 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TNFSF9P41273 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFSF9P41273 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFSF9P41273 SNORD53-201ENST00000579969 78 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.62□□□□□ -1.99
TNFSF9P41273 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFSF9P41273 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.62□□□□□ -1.99
TNFSF9P41273 BNIP3P24-201ENST00000593398 557 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AC087241.4-201ENST00000612441 480 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AC090617.7-201ENST00000623952 126 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 Z99496.1-201ENST00000469424 1477 ntBASIC2.62□□□□□ -1.99
TNFSF9P41273 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TNFSF9P41273 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
TNFSF9P41273 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFSF9P41273 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFSF9P41273 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFSF9P41273 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 BEND7P1-201ENST00000422058 457 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC019178.2-201ENST00000423595 505 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 RPL27AP8-201ENST00000424277 446 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 DPRXP1-201ENST00000426312 460 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.61□□□□□ -1.99
TNFSF9P41273 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 SEPT7P5-201ENST00000434048 306 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 SETP8-201ENST00000435341 628 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 USP9YP34-201ENST00000453983 808 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC244505.3-201ENST00000454598 187 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC010099.1-201ENST00000455434 375 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AL049714.1-201ENST00000466686 347 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.61□□□□□ -1.99
TNFSF9P41273 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 CASP1P1-201ENST00000526345 212 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 AC138915.2-201ENST00000569776 97 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFSF9P41273 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFSF9P41273 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFSF9P41273 AL445435.1-201ENST00000604232 665 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 RPL21P136-201ENST00000605378 396 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC007275.1-201ENST00000621243 671 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC025034.2-201ENST00000623264 286 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC027309.3-201ENST00000623419 351 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 AC087821.2-201ENST00000637086 450 ntBASIC2.61□□□□□ -1.99
TNFSF9P41273 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFSF9P41273 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TNFSF9P41273 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFSF9P41273 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
TNFSF9P41273 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFSF9P41273 MTND5P7-201ENST00000413558 1798 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 RNU6-1197P-201ENST00000391183 107 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 RPL7P27-201ENST00000403775 720 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 RNU2-72P-201ENST00000411175 163 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
TNFSF9P41273 AP000949.1-201ENST00000438328 629 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 LSM1P1-201ENST00000438629 273 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 THAP5P1-201ENST00000439089 262 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
TNFSF9P41273 AC005297.2-201ENST00000450430 606 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFSF9P41273 PNPLA4P1-201ENST00000458328 305 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFSF9P41273 AC023424.2-201ENST00000493479 777 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC147055.4-201ENST00000504399 745 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 ANXA2P1-201ENST00000505539 926 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFSF9P41273 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFSF9P41273 AL359273.1-201ENST00000510918 627 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFSF9P41273 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC021269.2-201ENST00000532318 330 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.6□□□□□ -1.99
TNFSF9P41273 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFSF9P41273 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.6□□□□□ -1.99
TNFSF9P41273 MIR3609-201ENST00000582661 80 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 MAGOH2P-202ENST00000584384 429 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 VN1R87P-201ENST00000596706 487 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 DUXAP4-201ENST00000603046 613 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC092574.1-201ENST00000609771 420 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AP000254.1-201ENST00000609934 520 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 TUG1_1.1-201ENST00000610654 145 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 DUXAP10-204ENST00000612052 616 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC073348.1-201ENST00000623002 331 ntBASIC2.6□□□□□ -1.99
TNFSF9P41273 AC010872.1-201ENST00000624225 675 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms