Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL18A1P39060 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.38□□□□□ -2.03
COL18A1P39060 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.38□□□□□ -2.03
COL18A1P39060 AC004775.1-201ENST00000607389 753 ntBASIC2.38□□□□□ -2.03
COL18A1P39060 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.38□□□□□ -2.03
COL18A1P39060 AC018926.3-201ENST00000618841 406 ntBASIC2.38□□□□□ -2.03
COL18A1P39060 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL18A1P39060 AC006378.2-201ENST00000623178 2476 ntBASIC2.38□□□□□ -2.03
COL18A1P39060 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL18A1P39060 RNU6-543P-201ENST00000362576 108 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 RNU6-1339P-201ENST00000363574 91 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL138880.1-201ENST00000405824 642 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 RNU6-272P-201ENST00000411028 104 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.37□□□□□ -2.03
COL18A1P39060 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.37□□□□□ -2.03
COL18A1P39060 MTCYBP24-201ENST00000420387 1106 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.37□□□□□ -2.03
COL18A1P39060 AC104332.2-201ENST00000429959 156 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 MTCO1P43-201ENST00000431831 488 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL513321.1-201ENST00000441175 761 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 NCOR1P1-202ENST00000486162 291 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 RNU6-488P-201ENST00000515918 99 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.37□□□□□ -2.03
COL18A1P39060 AC139103.1-201ENST00000534696 1030 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.37□□□□□ -2.03
COL18A1P39060 MIR4504-201ENST00000577413 92 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.37□□□□□ -2.03
COL18A1P39060 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.37□□□□□ -2.03
COL18A1P39060 AC135178.6-201ENST00000605314 398 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL627309.6-201ENST00000606857 840 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AL109659.3-201ENST00000624985 950 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.37□□□□□ -2.03
COL18A1P39060 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.37□□□□□ -2.03
COL18A1P39060 AC027514.1-201ENST00000588561 1603 ntBASIC2.37□□□□□ -2.03
COL18A1P39060 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 MIR525-201ENST00000384978 85 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 MIR1323-201ENST00000408090 73 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC073264.1-201ENST00000411508 416 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC007000.2-201ENST00000442564 487 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 RPS26P56-201ENST00000444468 240 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC006483.1-201ENST00000487308 313 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 RNF138P1-201ENST00000502765 546 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.36□□□□□ -2.03
COL18A1P39060 Y_RNA.670-201ENST00000516255 105 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 OR4P1P-201ENST00000530808 1136 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 MIR8081-201ENST00000611533 95 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.36□□□□□ -2.03
COL18A1P39060 AP003400.6-201ENST00000624698 740 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AL590396.2-201ENST00000636511 1041 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL18A1P39060 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
COL18A1P39060 MTND4P8-201ENST00000514997 1362 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AL136164.4-201ENST00000625013 2135 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 UBE2L2-201ENST00000254302 429 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 Y_RNA.122-201ENST00000363331 96 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL18A1P39060 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.36□□□□□ -2.03
COL18A1P39060 TRIAP1P1-201ENST00000427062 225 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC093422.3-201ENST00000428506 305 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 FABP5P3-201ENST00000437960 408 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 USP9YP15-201ENST00000442391 422 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 Z73417.1-201ENST00000447373 778 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AL021397.1-201ENST00000451806 248 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC012181.1-201ENST00000479895 423 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.36□□□□□ -2.03
COL18A1P39060 AC025881.1-201ENST00000518851 512 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL18A1P39060 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.36□□□□□ -2.03
COL18A1P39060 AC068620.4-201ENST00000636730 1182 ntBASIC2.36□□□□□ -2.03
COL18A1P39060 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL18A1P39060 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL18A1P39060 AC002546.1-201ENST00000588041 2504 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL18A1P39060 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
COL18A1P39060 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL18A1P39060 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL18A1P39060 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
COL18A1P39060 RNU6-600P-201ENST00000362524 99 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 RNU6-1181P-201ENST00000384191 106 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 DSTNP4-201ENST00000399472 474 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 RNU2-68P-201ENST00000410878 191 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 TOMM22P1-201ENST00000418578 312 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 ARL2BPP3-201ENST00000421226 480 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL18A1P39060 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.35□□□□□ -2.03
COL18A1P39060 PTGES3P5-201ENST00000455109 434 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 MTND2P6-201ENST00000455337 1030 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.35□□□□□ -2.03
COL18A1P39060 SYPL1P1-201ENST00000473622 768 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL18A1P39060 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.35□□□□□ -2.03
COL18A1P39060 ARL2BPP2-201ENST00000550907 489 ntBASIC2.35□□□□□ -2.03
COL18A1P39060 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms