Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 AP001521.1-201ENST00000609150 300 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC005332.6-201ENST00000613178 446 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC008083.4-201ENST00000615076 444 ntBASIC3.19□□□□□ -1.9
USP6P35125 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP6P35125 AC104454.1-201ENST00000421341 1401 ntBASIC3.18□□□□□ -1.9
USP6P35125 ZNF37BP-203ENST00000452306 1352 ntBASIC3.18□□□□□ -1.9
USP6P35125 Y_RNA.226-201ENST00000364337 114 ntBASIC3.18□□□□□ -1.9
USP6P35125 RNU6-730P-201ENST00000383954 104 ntBASIC3.18□□□□□ -1.9
USP6P35125 Y_RNA.493-201ENST00000384422 102 ntBASIC3.18□□□□□ -1.9
USP6P35125 AC016769.3-201ENST00000396562 315 ntBASIC3.18□□□□□ -1.9
USP6P35125 AIMP1P1-201ENST00000418670 937 ntBASIC3.18□□□□□ -1.9
USP6P35125 RPS3AP37-201ENST00000419176 745 ntBASIC3.18□□□□□ -1.9
USP6P35125 FNDC3CP-201ENST00000420795 1155 ntBASIC3.18□□□□□ -1.9
USP6P35125 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.18□□□□□ -1.9
USP6P35125 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.18□□□□□ -1.9
USP6P35125 AL034418.1-201ENST00000448675 860 ntBASIC3.18□□□□□ -1.9
USP6P35125 RFC5P1-201ENST00000454419 874 ntBASIC3.18□□□□□ -1.9
USP6P35125 TVP23BP2-201ENST00000455082 615 ntBASIC3.18□□□□□ -1.9
USP6P35125 PTGES3P5-201ENST00000455109 434 ntBASIC3.18□□□□□ -1.9
USP6P35125 DUXAP8-207ENST00000456786 622 ntBASIC3.18□□□□□ -1.9
USP6P35125 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
USP6P35125 AL049830.2-201ENST00000480072 201 ntBASIC3.18□□□□□ -1.9
USP6P35125 AC108734.3-201ENST00000481241 1165 ntBASIC3.18□□□□□ -1.9
USP6P35125 KLRA1P-201ENST00000503499 986 ntBASIC3.18□□□□□ -1.9
USP6P35125 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.18□□□□□ -1.9
USP6P35125 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
USP6P35125 POU5F1P7-201ENST00000508759 541 ntBASIC3.18□□□□□ -1.9
USP6P35125 MTCYBP16-201ENST00000509187 1129 ntBASIC3.18□□□□□ -1.9
USP6P35125 NDUFB4P9-201ENST00000511646 388 ntBASIC3.18□□□□□ -1.9
USP6P35125 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.18□□□□□ -1.9
USP6P35125 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
USP6P35125 AC021749.1-201ENST00000604322 607 ntBASIC3.18□□□□□ -1.9
USP6P35125 AC069545.1-201ENST00000605671 358 ntBASIC3.18□□□□□ -1.9
USP6P35125 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.18□□□□□ -1.9
USP6P35125 DUXAP10-204ENST00000612052 616 ntBASIC3.18□□□□□ -1.9
USP6P35125 AC023158.2-201ENST00000614876 543 ntBASIC3.18□□□□□ -1.9
USP6P35125 U73479.1-201ENST00000618062 168 ntBASIC3.18□□□□□ -1.9
USP6P35125 ADAM3A-203ENST00000461344 2157 ntBASIC3.17□□□□□ -1.9
USP6P35125 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.17□□□□□ -1.9
USP6P35125 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP6P35125 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 AL591416.1-201ENST00000404015 867 ntBASIC3.17□□□□□ -1.9
USP6P35125 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
USP6P35125 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 MTATP6P20-201ENST00000414147 562 ntBASIC3.17□□□□□ -1.9
USP6P35125 AL356320.2-201ENST00000417263 507 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
USP6P35125 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.17□□□□□ -1.9
USP6P35125 AL645638.1-201ENST00000440519 361 ntBASIC3.17□□□□□ -1.9
USP6P35125 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.17□□□□□ -1.9
USP6P35125 ZNF886P-201ENST00000450781 723 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.17□□□□□ -1.9
USP6P35125 RPL23AP62-201ENST00000463396 453 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
USP6P35125 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.17□□□□□ -1.9
USP6P35125 AC008837.2-201ENST00000513076 418 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 RNU6-415P-201ENST00000516252 97 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.17□□□□□ -1.9
USP6P35125 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.17□□□□□ -1.9
USP6P35125 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.17□□□□□ -1.9
USP6P35125 AL845331.3-202ENST00000562856 261 ntBASIC3.17□□□□□ -1.9
USP6P35125 AL049838.1-201ENST00000563647 981 ntBASIC3.17□□□□□ -1.9
USP6P35125 MTND1P8-201ENST00000571424 950 ntBASIC3.17□□□□□ -1.9
USP6P35125 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.17□□□□□ -1.9
USP6P35125 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.17□□□□□ -1.9
USP6P35125 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.17□□□□□ -1.9
USP6P35125 MTND3P19-201ENST00000603825 345 ntBASIC3.17□□□□□ -1.9
USP6P35125 AL035411.2-201ENST00000604022 421 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC016877.3-201ENST00000606778 504 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC004696.1-201ENST00000614345 607 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC073968.1-201ENST00000618594 637 ntBASIC3.17□□□□□ -1.9
USP6P35125 C2orf27A-204ENST00000623058 969 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC092184.1-201ENST00000625042 715 ntBASIC3.17□□□□□ -1.9
USP6P35125 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.17□□□□□ -1.9
USP6P35125 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
USP6P35125 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP6P35125 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP6P35125 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
USP6P35125 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
USP6P35125 Y_RNA.25-201ENST00000362528 102 ntBASIC3.16□□□□□ -1.9
USP6P35125 RNU6-989P-201ENST00000362756 107 ntBASIC3.16□□□□□ -1.9
USP6P35125 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
USP6P35125 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP6P35125 FAT1P1-201ENST00000406588 507 ntBASIC3.16□□□□□ -1.9
USP6P35125 NDUFB4P5-201ENST00000415445 361 ntBASIC3.16□□□□□ -1.9
USP6P35125 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 MTND2P9-201ENST00000422293 931 ntBASIC3.16□□□□□ -1.9
USP6P35125 AC092648.1-201ENST00000425870 423 ntBASIC3.16□□□□□ -1.9
USP6P35125 ARF4P2-201ENST00000430209 526 ntBASIC3.16□□□□□ -1.9
USP6P35125 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.16□□□□□ -1.9
USP6P35125 AC004022.1-201ENST00000447766 1066 ntBASIC3.16□□□□□ -1.9
USP6P35125 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms