Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC109635.4-202ENST00000531666 412 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 MIR4452-201ENST00000583004 71 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A5P29400 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A5P29400 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL4A5P29400 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A5P29400 ZNF271P-202ENST00000465539 1970 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A5P29400 MIR421-201ENST00000365696 85 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 MIR591-201ENST00000385290 95 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AL121972.1-201ENST00000402023 252 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 POLHP1-201ENST00000411806 470 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A5P29400 HMGB1P45-201ENST00000435986 653 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 RPL21P2-201ENST00000440049 481 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 RPS27P5-201ENST00000444247 244 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 RPS4XP11-201ENST00000446897 772 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 TOMM22P6-201ENST00000465035 409 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 RPS15AP36-201ENST00000492022 382 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 ARL4AP2-201ENST00000507378 601 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 RNA5SP468-201ENST00000516782 93 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A5P29400 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 AP001029.3-201ENST00000588063 596 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC019159.1-201ENST00000605094 187 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 KATNBL1P1-201ENST00000605192 748 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 AC113194.1-201ENST00000606037 500 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL4A5P29400 AL359740.1-201ENST00000624340 592 ntBASIC2.02□□□□□ -2.09
COL4A5P29400 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
COL4A5P29400 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A5P29400 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A5P29400 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
COL4A5P29400 AP001350.1-201ENST00000601906 1524 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AL391987.6-201ENST00000305671 199 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AL138880.1-201ENST00000405824 642 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 RPL19P1-201ENST00000411635 428 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC009237.2-201ENST00000421358 284 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AC005517.2-201ENST00000424673 553 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 RPL7P37-201ENST00000425095 738 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A5P29400 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 NF1P3-201ENST00000457709 450 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC092754.2-201ENST00000463506 460 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 LTV1P1-201ENST00000510683 1237 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC009268.1-201ENST00000561352 1203 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A5P29400 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.01□□□□□ -2.09
COL4A5P29400 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
COL4A5P29400 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A5P29400 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A5P29400 Y_RNA.327-201ENST00000365201 102 ntBASIC2□□□□□ -2.09
COL4A5P29400 RNU4-65P-201ENST00000410473 140 ntBASIC2□□□□□ -2.09
COL4A5P29400 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL4A5P29400 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 RPL21P66-201ENST00000426566 466 ntBASIC2□□□□□ -2.09
COL4A5P29400 NEK4P1-201ENST00000433383 879 ntBASIC2□□□□□ -2.09
COL4A5P29400 ARPC3P1-201ENST00000437218 533 ntBASIC2□□□□□ -2.09
COL4A5P29400 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 RPL7P5-201ENST00000471472 736 ntBASIC2□□□□□ -2.09
COL4A5P29400 AC012181.1-201ENST00000479895 423 ntBASIC2□□□□□ -2.09
COL4A5P29400 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2□□□□□ -2.09
COL4A5P29400 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2□□□□□ -2.09
COL4A5P29400 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2□□□□□ -2.09
COL4A5P29400 AC104581.2-201ENST00000572227 430 ntBASIC2□□□□□ -2.09
COL4A5P29400 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2□□□□□ -2.09
COL4A5P29400 AC034102.8-201ENST00000615146 484 ntBASIC2□□□□□ -2.09
COL4A5P29400 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2□□□□□ -2.09
COL4A5P29400 AC095038.3-201ENST00000634439 195 ntBASIC2□□□□□ -2.09
COL4A5P29400 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
COL4A5P29400 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
COL4A5P29400 AC008568.2-201ENST00000623862 2313 ntBASIC2□□□□□ -2.09
COL4A5P29400 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL4A5P29400 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
COL4A5P29400 METTL21EP-201ENST00000298105 713 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 Y_RNA.295-201ENST00000364918 102 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A5P29400 RNU6-174P-201ENST00000410406 106 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms