Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SNORD21-201ENST00000383953 95 ntBASIC3.67□□□□□ -1.82
BDNFP23560 RNU6-253P-201ENST00000384730 105 ntBASIC3.67□□□□□ -1.82
BDNFP23560 RNU6-278P-201ENST00000390945 109 ntBASIC3.67□□□□□ -1.82
BDNFP23560 PIGPP2-201ENST00000411569 458 ntBASIC3.67□□□□□ -1.82
BDNFP23560 HSFY4P-201ENST00000415994 1181 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AL365496.1-201ENST00000426885 215 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AC104332.2-201ENST00000429959 156 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.67□□□□□ -1.82
BDNFP23560 MTND1P32-201ENST00000433043 938 ntBASIC3.67□□□□□ -1.82
BDNFP23560 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.67□□□□□ -1.82
BDNFP23560 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.67□□□□□ -1.82
BDNFP23560 FAM103A2P-201ENST00000444122 354 ntBASIC3.67□□□□□ -1.82
BDNFP23560 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.67□□□□□ -1.82
BDNFP23560 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.67□□□□□ -1.82
BDNFP23560 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.67□□□□□ -1.82
BDNFP23560 LARP1BP2-201ENST00000486594 519 ntBASIC3.67□□□□□ -1.82
BDNFP23560 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.67□□□□□ -1.82
BDNFP23560 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.67□□□□□ -1.82
BDNFP23560 SNORA31.26-201ENST00000517250 137 ntBASIC3.67□□□□□ -1.82
BDNFP23560 IGKV2-26-201ENST00000518305 343 ntBASIC3.67□□□□□ -1.82
BDNFP23560 MTCO1P47-201ENST00000523889 1271 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AP000926.4-201ENST00000527351 454 ntBASIC3.67□□□□□ -1.82
BDNFP23560 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.67□□□□□ -1.82
BDNFP23560 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AC005951.2-201ENST00000576282 495 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AC061975.8-201ENST00000587058 721 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AL606834.2-201ENST00000602954 668 ntBASIC3.67□□□□□ -1.82
BDNFP23560 AC092953.2-201ENST00000608000 699 ntBASIC3.67□□□□□ -1.82
BDNFP23560 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.67□□□□□ -1.82
BDNFP23560 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
BDNFP23560 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.67□□□□□ -1.82
BDNFP23560 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
BDNFP23560 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.67□□□□□ -1.82
BDNFP23560 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BDNFP23560 ZNF876P-202ENST00000398732 1485 ntBASIC3.67□□□□□ -1.82
BDNFP23560 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
BDNFP23560 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.66□□□□□ -1.82
BDNFP23560 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BDNFP23560 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BDNFP23560 SNORA72.3-201ENST00000365074 132 ntBASIC3.66□□□□□ -1.82
BDNFP23560 RNU6-140P-201ENST00000384566 108 ntBASIC3.66□□□□□ -1.82
BDNFP23560 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 BX323014.1-201ENST00000412876 237 ntBASIC3.66□□□□□ -1.82
BDNFP23560 RPL21P24-201ENST00000413752 448 ntBASIC3.66□□□□□ -1.82
BDNFP23560 RPL30P2-201ENST00000414021 291 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 AL358075.3-201ENST00000426289 226 ntBASIC3.66□□□□□ -1.82
BDNFP23560 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 Z96811.1-201ENST00000445880 108 ntBASIC3.66□□□□□ -1.82
BDNFP23560 DDX3P2-201ENST00000446138 111 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.66□□□□□ -1.82
BDNFP23560 MTCO3P16-201ENST00000454456 754 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 AC092185.1-201ENST00000491371 97 ntBASIC3.66□□□□□ -1.82
BDNFP23560 RPS27P26-201ENST00000494583 239 ntBASIC3.66□□□□□ -1.82
BDNFP23560 HSPD1P15-201ENST00000505573 1122 ntBASIC3.66□□□□□ -1.82
BDNFP23560 SEM1P1-201ENST00000506694 209 ntBASIC3.66□□□□□ -1.82
BDNFP23560 MTND5P13-201ENST00000513046 1079 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.66□□□□□ -1.82
BDNFP23560 AP004247.1-201ENST00000531556 1289 ntBASIC3.66□□□□□ -1.82
BDNFP23560 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 DUXAP6-201ENST00000553858 601 ntBASIC3.66□□□□□ -1.82
BDNFP23560 NCAPGP2-201ENST00000557911 754 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.66□□□□□ -1.82
BDNFP23560 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.66□□□□□ -1.82
BDNFP23560 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.66□□□□□ -1.82
BDNFP23560 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 AC010620.2-201ENST00000600135 313 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AL031281.1-201ENST00000604049 488 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC112187.2-201ENST00000604345 283 ntBASIC3.66□□□□□ -1.82
BDNFP23560 AC007038.2-201ENST00000608095 740 ntBASIC3.66□□□□□ -1.82
BDNFP23560 TUSC7.1-201ENST00000610969 165 ntBASIC3.66□□□□□ -1.82
BDNFP23560 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.66□□□□□ -1.82
BDNFP23560 AC091965.5-201ENST00000624785 342 ntBASIC3.66□□□□□ -1.82
BDNFP23560 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
BDNFP23560 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BDNFP23560 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
BDNFP23560 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 Y_RNA.18-201ENST00000362461 102 ntBASIC3.65□□□□□ -1.83
BDNFP23560 RNU1-33P-201ENST00000364249 162 ntBASIC3.65□□□□□ -1.83
BDNFP23560 RNU1-39P-201ENST00000383897 165 ntBASIC3.65□□□□□ -1.83
BDNFP23560 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BDNFP23560 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.65□□□□□ -1.83
BDNFP23560 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.65□□□□□ -1.83
BDNFP23560 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.65□□□□□ -1.83
BDNFP23560 AC233702.1-201ENST00000482905 502 ntBASIC3.65□□□□□ -1.83
BDNFP23560 AP000563.1-201ENST00000490865 758 ntBASIC3.65□□□□□ -1.83
BDNFP23560 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
BDNFP23560 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
BDNFP23560 AP006245.1-201ENST00000522549 120 ntBASIC3.65□□□□□ -1.83
BDNFP23560 AC026333.2-201ENST00000542164 106 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms