Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR491-201ENST00000384877 84 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 RNU6-754P-201ENST00000391166 107 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 RNA5SP354-201ENST00000391247 136 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC007899.1-201ENST00000412776 775 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 MTND1P21-201ENST00000412991 285 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 USP9YP24-201ENST00000434374 697 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 USP9YP17-201ENST00000444617 696 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 CBWD4P-201ENST00000445695 655 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 BMI1P1-201ENST00000445879 941 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC092155.2-201ENST00000454675 477 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 ATG12P2-201ENST00000456830 416 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC233702.1-201ENST00000482905 502 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 MTATP6P9-201ENST00000515039 680 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC022662.1-201ENST00000580252 331 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC100793.4-201ENST00000613683 429 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC099506.2-201ENST00000623074 221 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC002064.3-201ENST00000623448 346 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 AL138713.1-201ENST00000624026 2130 ntBASIC3.15□□□□□ -1.91
HLA-DPA1P20036 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DPA1P20036 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 RNU6-777P-201ENST00000364265 104 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 RNU1-39P-201ENST00000383897 165 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 RPL7P25-201ENST00000404151 721 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 NANOGP5-201ENST00000424456 877 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 OR2AS1P-201ENST00000427827 319 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC104332.2-201ENST00000429959 156 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 FTH1P1-201ENST00000437933 532 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AL714022.1-201ENST00000439897 151 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 PTENP1-201ENST00000447117 1215 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC116337.2-201ENST00000477662 156 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC021146.5-201ENST00000503544 545 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC009901.1-201ENST00000506703 541 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 PRELID3BP8-201ENST00000604148 295 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AL139022.2-201ENST00000606934 443 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC103710.4-201ENST00000609301 899 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC099063.3-201ENST00000642066 185 ntBASIC3.14□□□□□ -1.91
HLA-DPA1P20036 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DPA1P20036 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RNU1-105P-201ENST00000363470 161 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RNU6-636P-201ENST00000384598 107 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 MIR320C1-201ENST00000408566 88 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AL512649.1-201ENST00000428997 581 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms