Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 RNU6-328P-201ENST00000390887 106 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 CCNG1P1-201ENST00000406783 885 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 RN7SKP53-201ENST00000411337 315 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 RPL21P32-201ENST00000419877 477 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC005326.1-201ENST00000429197 123 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 EPS15P1-201ENST00000448836 336 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 RPL23AP14-201ENST00000468281 468 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC109486.1-201ENST00000486833 374 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 PCBP2P3-201ENST00000509726 843 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AL359273.1-201ENST00000510918 627 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 SNORA70.16-201ENST00000516390 95 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 SNORA31.22-201ENST00000517204 135 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AP005205.1-201ENST00000563503 508 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 COX6CP3-201ENST00000580869 223 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC068790.3-201ENST00000602988 553 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 OR10AB1P-201ENST00000609613 938 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MIR3974-201ENST00000637126 96 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RAB40ALP0C0E4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 FRG1CP-201ENST00000358464 769 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MT-TH-201ENST00000387441 69 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 RNU6-754P-201ENST00000391166 107 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 FTH1P1-201ENST00000437933 532 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 RPL22P17-201ENST00000438729 315 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 RPL23AP41-201ENST00000484754 458 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 RNU6-1003P-201ENST00000517099 105 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 FAM60DP-201ENST00000524174 632 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC037471.2-201ENST00000564941 598 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 MIR3921-201ENST00000577308 85 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC008507.1-201ENST00000587506 734 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC006557.5-201ENST00000603126 811 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL160281.1-201ENST00000605307 311 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL031775.1-201ENST00000607014 887 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC004908.2-201ENST00000609090 574 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC012360.2-201ENST00000609349 391 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC008121.2-201ENST00000614647 523 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AL603758.1-201ENST00000618654 241 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC012150.2-201ENST00000621300 544 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
RAB40ALP0C0E4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
RAB40ALP0C0E4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.89
RAB40ALP0C0E4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.28□□□□□ -1.89
RAB40ALP0C0E4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms